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Name : MDS_2172 (MDS_2172) Accession : YP_004379955.1 Strain : Pseudomonas mendocina NK-01 Genome accession: NC_015410 Putative virulence/resistance : Unknown Product : ultraviolet light resistance protein B Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : - Position : 2380712 - 2381971 bp Length : 1260 bp Strand : + Note : - DNA sequence : ATGTCGATTTTCGCCCTGGTGGACTGCAATAACTTCTATGTGAGCTGCGAGCGGCTGTTCCGGCCGGATCTGCGTAGCGT GCCCATCGTGGTGCTGAGCAATAACGACGGTTGCGTGGTGAGCCGCAGCAACGAGGCCAAGGCGTTGGGCATCGGCATGG GCGAGCCTTACTTCAAGATTCGCGACCTGGTGCGCGGCCACGGGGTGTTGGCGTTCAGCAGTAACTACGCGCTCTACGGC GATATCTCGGCCCGTGTGCAGGCGGTGCTACGCGAGATGGCACCGCGTATCGAGGTGTACTCGATCGACGAATGCTTCCT GGACCTCACGGGGCTGGGCCGGCCGCTGGCTGCCTATGGCCGGCATGCGCGGGCCGAGGTGCTGCGCCTGGCGGGTATGC CGGTTGGGGTGGGCATCAGCACCACGAAAACCCTGGCCAAGCTGGCCAACTGGGCGGCAAAGCGGCGCAGCCAGAGCGGG GTGGTAGTGGCGACAAAGCCCGAGCAGCAGGGGGCGCTGTTGAAGGATGCACCGCTGGGTGAGGTGTGGGGTATCGGGCG CAAGCTGCAGGCGCACCTGGGGGCGCTGGGCATCGAAACCGCGTGGGACTTGGCGCAGCAGGACGCCAAGACCATGCGCA AGCAGTTCTCAGTAGTGCTTGAAAAGACGATTCGTGAGCTGCGCGGCGAGCCGTGCTTCGCCCTGGACGAAGGGCCGGAG CCGAAGCAGATGATCACCTGCAGCCGCTCGTTCTCGAACCGGGTAACGACCTTGGCGCCGCTGCGCGAGGCTGTGGCCAC CTACGCCTGCCGGGCCGGAGAGAAGCTACGGGCGCAAGGCGATGTGTGCCAATTACTGCAGGTGTATATCCGCACTGGGG TATTTAACCCGGACGAAGCGCGCTACGCACGCACGGCCAGCGTGCCGCTGCATACGCCGAGCAATGACTCGCGTGATCTG GTGCAGGCGGCGCTGGCCGGCCTGGAGAGCATTTACAGGGACGGCTACCGGTACCAGAAAGCCGGGGTGATGCTGATGAA CCTGGCCAGCCCAGGGCAGATACAGACTGACCTGTTCGCGCCAGAGCCGCGCCCGCGCAGTGCGGAGCTGATGGCGACGG TGGACAGGATCAACCACAGCATGGGGCGCGGCACTGTGCGGCTGGCGCGCGTGCCGGCGCTGGGTGGCTGGTCAATGAAG CAGGAACTACGTTCGCCGCGCTATACCAGCCAGTGGGGTGATTTGCCCGAGGTGCGTTGA Protein sequence : MSIFALVDCNNFYVSCERLFRPDLRSVPIVVLSNNDGCVVSRSNEAKALGIGMGEPYFKIRDLVRGHGVLAFSSNYALYG DISARVQAVLREMAPRIEVYSIDECFLDLTGLGRPLAAYGRHARAEVLRLAGMPVGVGISTTKTLAKLANWAAKRRSQSG VVVATKPEQQGALLKDAPLGEVWGIGRKLQAHLGALGIETAWDLAQQDAKTMRKQFSVVLEKTIRELRGEPCFALDEGPE PKQMITCSRSFSNRVTTLAPLREAVATYACRAGEKLRAQGDVCQLLQVYIRTGVFNPDEARYARTASVPLHTPSNDSRDL VQAALAGLESIYRDGYRYQKAGVMLMNLASPGQIQTDLFAPEPRPRSAELMATVDRINHSMGRGTVRLARVPALGGWSMK QELRSPRYTSQWGDLPEVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 9e-90 | 55 |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 1e-102 | 52 |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 7e-95 | 48 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 7e-95 | 48 |
