Gene Information

Name : MDS_0022 (MDS_0022)
Accession : YP_004377805.1
Strain : Pseudomonas mendocina NK-01
Genome accession: NC_015410
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3157
EC number : -
Position : 28721 - 29209 bp
Length : 489 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTGTTGATATCTTCATCAAGATCGGTGACATCAAGGGCGAGTCCCAGGACAAGACCCACAAGGACGAAATCGAAGT
GCTCAACTGGAGCTGGGGCATGTCCCAGTCCGGCAATATGCACACCGGCACCGGTGGCGGCGCGGGCAAGGTGAGCATCC
AGGACCTGTCGCTGACCAAGTACGTCGACAAGGCTACCCCCAACCTGATGATGCATTGCTCCAGCGGCAAGCACGTGCCC
AAGGTCACCCTGACCGTGCGCAAGGCAGGCGGTGATTCCCAGGTCGAGTACCTGATCATCAACCTCGAAGAAGTGCTGAT
CTCCTCGCTGAGCACTGGCGGTTCGGGCAACGACGACCGCCTGATCGAGAACGTGACCCTGAACTTCGCCAAAGTCACGG
TCGACTACCAGCCGCAGAAAGCCGACGGCACCAAGGAAGGCGGCCCGATCAAGTACGGCTGGAACATCCGTTCCAACGTC
AAGATCTGA

Protein sequence : 
MAVDIFIKIGDIKGESQDKTHKDEIEVLNWSWGMSQSGNMHTGTGGGAGKVSIQDLSLTKYVDKATPNLMMHCSSGKHVP
KVTLTVRKAGGDSQVEYLIINLEEVLISSLSTGGSGNDDRLIENVTLNFAKVTVDYQPQKADGTKEGGPIKYGWNIRSNV
KI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0302 NP_454882.1 conserved hypothetical protein Not tested SPI-6 Protein 1e-28 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MDS_0022 YP_004377805.1 hypothetical protein VFG2071 Protein 2e-50 78