Gene Information

Name : MDS_1826 (MDS_1826)
Accession : YP_004379609.1
Strain : Pseudomonas mendocina NK-01
Genome accession: NC_015410
Putative virulence/resistance : Virulence
Product : flagellar hook-associated protein FlgK
Function : -
COG functional category : N : Cell motility
COG ID : COG1256
EC number : -
Position : 2005080 - 2007125 bp
Length : 2046 bp
Strand : +
Note : -

DNA sequence :
ATGGCTGACCTATTGAACATAGGCCTCTCGGGCCTGGCGGCGAATAAGACCTCGCTGGCCGTTACCGGTCACAATATCGT
CAACGTCAATACACCAGGCTTCTCCCGTCAGGAGACGATCCAGGCCACTCGCACGCCGCAGTTCAGCGGGGCCGGTTACA
TCGGTTCGGGTACCACCCTGACCGACGTAAGGCGCATCTATAACGACTTCCTCAATACCCAGGTGCGCAGCAGCACTGCA
CTCAACAGCGATACCAAGGCGTACCTGAGTCAGATCAACCAGCTCGATTCGTTGCTGGCCGGTAGTAATACGGGGGTTAC
TCCTGCTATGCAGAAGCTGTTCGCAGCGCTGCAGACCGCAGCGGAAGACCCAGCCAACGTGCCAGCCCGGCAACTGGTGC
TGTCCGAAGCGGAAGGCCTGGCCAAGCGTTTCAACAACATCTACGACCGCCTGTACGAGCAAAACGCGTTCATCAACAAG
CAGCTCTCGGCGGTGACCGATCAGGTAAACCAGCTGGCTACGTCCATTGCTGGCTACAACGATGCGATCGCCGTAGCGTC
CTCCAATGGCCAGGCCCCCAACGACCTGCTCGATGCCCGTGAAGAGGCGGTGCGCAAGCTCTCCGAGTTCGTCGGCGTCA
CCGTGGTGCCGCAGGACGACAACTCCTATAACCTCTTTATCGGTTCTGGCCAGCCCCTGGTGGTGGGAAAGAATGCGGCG
CGTCTGGAAGTGACACCGGGGCTGTCCGACCCGCTGCGCAGCGAGATCCAGTTCGTCAGCGGCAACTCGAAGCAGAATGT
CAGTTCGCTGATCACTGGCGGAGAAATGGGCGGCCTGTTGCGTTATCGGCAGGACGTGCTGGATACATCGATGAATTCCA
TCGGTCGACTGTCCTTGTCCATTGCCGACCAGATGAATCGCCAACTGGGGCAGGGGCTCGATCTAAATGGTGAGTTCGGC
AAGGAGCTGTTCCGTCCGATCAACGACCCCCTGTTGCTGGCTCAGCGTAGCCTCGCGCGCATCGGTAACAGCGATCCGAT
GGCAAACCTCAACGTCAGCATCACCGACACCACGCGTCTGACCACCAGCGATTATGAAGTCGAGTTCACCAGCGCTACTG
AATATGTGGTACGCCGCTCTTCCGATGGCGCGATGTTCCCGGCCAGCCCGGCGACCTTCGATATCAACACGGTGCCCGCG
CCGGAAATCGACGGATTTTCCCTGAGCGTGGCGCAGGGCACCTTCGCTGCCGGCGACCGCTTCACCGTGATGCCGACCCG
CAATGCGGCGCGCGACACCCGTGCCGATATGAAAAATCCGGAAGAACTGGCCTTCGCCGCTCCGCTGAAGACCGAGTCGA
GCCCGGGCAATACCGGCACCGGTACCGTGAGCCAGCCCAGGCTCAGTACCGAGATCGACATCTACGATCCGGCAGCCCAG
GCCGACATGGAGACCAGCCTGCGCAATGCCCCACCGATGCGCATTGTCATGGGCGCTGCCGGTGGTGCTACCCAGTCTTA
TGAAGTACTGGACATCAACGGCAACGTGATCAACAGCGGCAGCATTACGCCGGGGCAGAGCAACAAGATCACCATCAACG
TGCCGGCTAATCCGCCGAACGTACCCAGCGCATTTGCCTACGAAGTAAGTATCGGCGGGCGCCCCTCGCAGGGCGACAAT
TTTTCGGTGTCGTTCAACACCAACGGCGTTTCGGATAACCGCAATGCGCTGAATCTGGTTGATTTGCAGAAGAAATCGGT
GATCGGCATTAACCCGGCAGCGCCCGATACTACCGGAGCGAGCTTCTCCGATGCCTATGGAGATTTGGTCGAGCGAGTTG
GCACCCTGACCAGCCAGGCAAGGGTCGATGGTGAGGCGACTGGCGCGATTCTCAAGCAGGCCACAGACAACCGTGATTCT
GTTTCCGGGGTAAACCTCGATGAAGAGGCTGCCAAGCTGATTCAGTTCGAGCAGTACTACCAGGCATCGGCACAGATCAT
TCAAGTTGCGCGCAACCTGTTCGATACTCTGATCAATTCATTCTGA

Protein sequence :
MADLLNIGLSGLAANKTSLAVTGHNIVNVNTPGFSRQETIQATRTPQFSGAGYIGSGTTLTDVRRIYNDFLNTQVRSSTA
LNSDTKAYLSQINQLDSLLAGSNTGVTPAMQKLFAALQTAAEDPANVPARQLVLSEAEGLAKRFNNIYDRLYEQNAFINK
QLSAVTDQVNQLATSIAGYNDAIAVASSNGQAPNDLLDAREEAVRKLSEFVGVTVVPQDDNSYNLFIGSGQPLVVGKNAA
RLEVTPGLSDPLRSEIQFVSGNSKQNVSSLITGGEMGGLLRYRQDVLDTSMNSIGRLSLSIADQMNRQLGQGLDLNGEFG
KELFRPINDPLLLAQRSLARIGNSDPMANLNVSITDTTRLTTSDYEVEFTSATEYVVRRSSDGAMFPASPATFDINTVPA
PEIDGFSLSVAQGTFAAGDRFTVMPTRNAARDTRADMKNPEELAFAAPLKTESSPGNTGTGTVSQPRLSTEIDIYDPAAQ
ADMETSLRNAPPMRIVMGAAGGATQSYEVLDINGNVINSGSITPGQSNKITINVPANPPNVPSAFAYEVSIGGRPSQGDN
FSVSFNTNGVSDNRNALNLVDLQKKSVIGINPAAPDTTGASFSDAYGDLVERVGTLTSQARVDGEATGAILKQATDNRDS
VSGVNLDEEAAKLIQFEQYYQASAQIIQVARNLFDTLINSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
flgK AAK15324.1 flagellar hook-associated protein 1 FlgK Virulence Not named Protein 6e-158 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MDS_1826 YP_004379609.1 flagellar hook-associated protein FlgK VFG1244 Protein 5e-160 51