Gene Information

Name : MDS_1708 (MDS_1708)
Accession : YP_004379491.1
Strain : Pseudomonas mendocina NK-01
Genome accession: NC_015410
Putative virulence/resistance : Unknown
Product : short-chain dehydrogenase/reductase SDR
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1856523 - 1857287 bp
Length : 765 bp
Strand : +
Note : -

DNA sequence : 
ATGAACAACGCTCTTCTGCTCGACGGCAAGGTAGCCATGATTTCGGGCGCGGCCTCGGCGCGCGGCATCGGCCTGGCTAC
TGCTCGCCTGTTCGCCAGCCATGGCGCCACGGTGGCCATTCTCGATCTCGATGAGGGAGCTGCCATCGAAGCGGCGGCTG
CCATCGGCCCGCAGCATCGCGGCTATGCCTGCAACGTGGCCGACAAGGACGCCTGCCTGCAGGCCACCGAGCGTGCCATC
GCCGACTTCGGTCGCATCGACGTGCTGATCAACAATGCCGGCATTACCCAGCCGGTGAAGACCCTGGAAATCGACCCGGC
AAGCTGGGATCGCATCCTCGACGTCAACCTGCGCGGCGTGTTGTACCTGTCCCAGGCCGTCATTCCACACATGCAGGCCC
AAGGCAGCGGTTCCATCGCCTGCATGTCGTCGGTGTCGGCCCAGCGTGGCGGCGGCATCCTCGGCGGCCCGCACTACTCG
GCAGCGAAGGCCGGTGTGCTGGGGCTGGCCAAGGCCATGGCGCGCGAATTCGGGCCAAGCAATATCCGCGTCAATTGCGT
CACCCCCGGCCTGATCCAGACCGACATCAGCGCCGGCAAGCTCAGCGATCAACAGAAGGCCGAGATTGCCGCCAGCATCC
CGCTCAATCGCCTGGGCAACGCCGAGGAAGTCGCTGGTGCCTATCTGTTCCTGGCTTCGAATCTGTCGGCCTACATCACC
GGTGCGGTGATCGACGTCAACGGTGGCATGCTCATCCACGGTTGA

Protein sequence : 
MNNALLLDGKVAMISGAASARGIGLATARLFASHGATVAILDLDEGAAIEAAAAIGPQHRGYACNVADKDACLQATERAI
ADFGRIDVLINNAGITQPVKTLEIDPASWDRILDVNLRGVLYLSQAVIPHMQAQGSGSIACMSSVSAQRGGGILGGPHYS
AAKAGVLGLAKAMAREFGPSNIRVNCVTPGLIQTDISAGKLSDQQKAEIAASIPLNRLGNAEEVAGAYLFLASNLSAYIT
GAVIDVNGGMLIHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 7e-63 68
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 6e-63 68
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 4e-63 68
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 3e-63 68
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 1e-62 67