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Name : MDS_1670 (MDS_1670) Accession : YP_004379453.1 Strain : Pseudomonas mendocina NK-01 Genome accession: NC_015410 Putative virulence/resistance : Virulence Product : 3-deoxy-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : - Position : 1817441 - 1818205 bp Length : 765 bp Strand : + Note : - DNA sequence : ATGAGTGCAGCCTTCACCGTTGTCATTCCCGCCCGTTACGCCTCCACCCGTCTGCCCGGCAAGCCGCTGCAGGATATTGC CGGCAAGCCGATGGTGCAGCACGTCTGGGAGCAGGCGAAGAAGAGTTCGGCTAGTCGCGTCGTGATCGCCACCGACGATG CGCGCATCGTTGACGCCTGTCAGGCGTTCGGCGCCGAGGTACTGCTGACCCGCGAGGATCACAACTCCGGCACCGACCGC CTGGCCGAAGTGGCCAGCCAGCTCGGTTTGCCGGCCGAAGCCATCGTGGTCAACGTACAGGGCGACGAACCGCTGATCCC GCCTGCGATCATCGATCAGGTGGCGGCTAATCTGGCGGCCAATCCACAGGCCGGTATCGCCACCCTGGCCGAGCCCATCG AGGACGTCACCGCGCTGTTCAACCCCAACGTGGTCAAGGTGGTCGCCGACAAGAACGGCCTGGCTTTGACCTTCAGCCGT GCGCCGCTGGCCTGGGCGCGCGATGCCTTCGCCAAGAACCGCGATGTGTTGCCGCAAGGTGTGCCGTACCGCCGTCATAT CGGTATCTACGCCTACCGCGCCGGCTTCCTGCATGACTTCGTGGCCTGGGGGGCATGCTGGCTGGAAGACACCGAATGCT TGGAGCAACTGCGTGCGCTGTACAACGGCGTGCGCATCCATGTCGCCGATGCCCTCGAAGCACCGGCCGCCGGTGTCGAT ACCGCCGAAGACCTGGAGCGGGTGCGCCGCCTGCTGGGGGCCTGA Protein sequence : MSAAFTVVIPARYASTRLPGKPLQDIAGKPMVQHVWEQAKKSSASRVVIATDDARIVDACQAFGAEVLLTREDHNSGTDR LAEVASQLGLPAEAIVVNVQGDEPLIPPAIIDQVAANLAANPQAGIATLAEPIEDVTALFNPNVVKVVADKNGLALTFSR APLAWARDAFAKNRDVLPQGVPYRRHIGIYAYRAGFLHDFVAWGACWLEDTECLEQLRALYNGVRIHVADALEAPAAGVD TAEDLERVRRLLGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 3e-40 | 44 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 4e-40 | 44 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 3e-40 | 43 |
