Gene Information

Name : MDS_1662 (MDS_1662)
Accession : YP_004379445.1
Strain : Pseudomonas mendocina NK-01
Genome accession: NC_015410
Putative virulence/resistance : Resistance
Product : lipoprotein releasing system, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1810258 - 1810959 bp
Length : 702 bp
Strand : +
Note : -

DNA sequence : 
ATGAATCAGAACGCCATGAAACAGCACAATGCCGTGCTCAGCTGCCGCAACCTGAGCAAGCGTTACGATGAGGGGCCCGA
GTCGGTGGTGGTGCTCGATGGGCTCGAACTGGAACTCTTCCCCGGTGAGCGCGTGGCCATCGTCGGCAGTTCCGGTTCCG
GCAAGAGCACCCTGCTGAACATGCTCGGCGGCCTGGATACGCCTAGCGAGGGCAGTGTCTGGCTAGCCGGTGAGCAACTG
TCGGCGCTCAGCGAGACTGCCCGCGGCCTGCTGCGTAACCGGGCGTTGGGTTTCGTCTATCAATTCCATCACCTGCTGGC
CGAGTTCACCGCGCTGGAGAACGCCTGCATGCCGCTGCTGATCGGCAAGACGTCGATCGCCGAAGCGCGCCAGCGCGCGA
CTGCATTGCTGGAGCGCGTGGGCCTGGGGCATCGCCTCAATCACAAGCCGTCAGAACTGTCCGGTGGCGAGAGGCAGCGT
GTGGCCATCGCCCGCGCCCTGGTCAATCGCCCGGGGTTGGTACTGCTTGACGAGCCTACCGGTAACCTCGACCAGCACAC
CGCCGAAGGCATTCAGGAGCTGATGCGCGAGCTCAGCCGCGACTCCAATACCGCATTCTTGGTGGTGACCCACGACATGC
AGCTGGCGCGGCAGATGGACCGCGTGCTCAGCCTGCAGGACGGCAAGCTGGTGGCCCTCTGA

Protein sequence : 
MNQNAMKQHNAVLSCRNLSKRYDEGPESVVVLDGLELELFPGERVAIVGSSGSGKSTLLNMLGGLDTPSEGSVWLAGEQL
SALSETARGLLRNRALGFVYQFHHLLAEFTALENACMPLLIGKTSIAEARQRATALLERVGLGHRLNHKPSELSGGERQR
VAIARALVNRPGLVLLDEPTGNLDQHTAEGIQELMRELSRDSNTAFLVVTHDMQLARQMDRVLSLQDGKLVAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-25 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-27 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
MDS_1662 YP_004379445.1 lipoprotein releasing system, ATP-binding protein NC_012469.1.7686878. Protein 2e-37 44
MDS_1662 YP_004379445.1 lipoprotein releasing system, ATP-binding protein NC_008702.1.4606598. Protein 2e-31 43