|
Name : MDS_0016 (MDS_0016) Accession : YP_004377799.1 Strain : Pseudomonas mendocina NK-01 Genome accession: NC_015410 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : S : Function unknown COG ID : COG3522 EC number : - Position : 21771 - 23105 bp Length : 1335 bp Strand : - Note : - DNA sequence : ATGTCCTGGAACAACCGTGTGATCTGGTCCGAAGGCATGTTCATCGGCACCCAGCATTTCCAGCAACATGATCGCTACCT GGAGGCTCTGATCGATGCCCGCAGCCGCCCACTGTCAGCCGCCGGCTGGGGTTTCGCCGAGCTGCAGCTGGATATCGGCC TGCTGGCACAGGGCAAGCTGGCCATCGTCAGCGCCCGTGGCCTGTTGCCTGACGGCACGCCGTTCAACATTCCCCAGGAT GACGTGGCGCCGGAGCCGCTGGATATCCCCGACGACCTGCGCGACGGCGTGATCTATCTGGCCCTGCCGCTGCGCCGGGC GGGTGTGCGAGACACCGTCGAAGCGGGTGAAGCACTGGGCGGCGCGCGCTATCGCGGCCAGGTCCGCGAAGTGCGCGACG ACAACGCAGCCTTCGAAAGCCGTGTGCCGGTGATGGTTGGCGAACGCGCCCTGCGCCTGTTGACCGCCGCCGATGGCCTG CAGGAATACGCCGTGTTGGGCGTAGCGCGCGTGCGCGAGAAACGCGCCGACCGCGCCCTGGTGCTGGACGAACAGTACAT CCCGCCGCTGCTCGACGTAGCAGCCAGCGCGCCACTGGCTGCCTTTCGCGGCGAGCTGCTGGGCTTGCTGCATCAGCGCG GCGAAGCCCTGGCCGGGCGCGTGGTGGCCTCCAGCGCTGGCGGCGCCTCGGAAATCGCCGACTTCATGCTGCTGCAACTG GTCAACCGCGCGCAGCCGCTGTTCGCCCACCTGGCGCAGATGCAGCCCCTGCACCCGGAGCGCCTGTACAGCGAATTGCT GGCTCTGGCCGGCGAGTTCGCCACCTTCTCCAACGCCGCGCGCCGGCCGCTGGAGTTCCCGCCCTACATCCACGATGACC TGCAGGCCAGCTTCACTCCGGTGATGCAGGCACTGCGTGAAGCCTTGTCGATGCTGATCGACAGCAAGGCCGTAGCCATT CCCATCGTCGAGAAGGCCTACGGCGTGCACGTGGCCATGCTGGCTGACCGCAGCCTGCTGGACAGTGCCAGCTTCATCCT CGTGGTCCGCGCCGACATGCCTGCCGAGACCCTGCGCGGGCGCTTCGGCCAGCAGAGCAAGATCGGCTCGGTGGAGCACA TCCGCGATCTGGTCAACCTGCAGCTACCGGGCATCAACCTGCTGCCGCTGCCGGTGGCCCCACGGCAGATTCCGTTCCAC GCCGGCTCGACCTACTACGAGCTCGACCGTGGCAGCGAACACTGGAAGCAGCTGGCGCACTCCGGCGGCTTCGCTTTCCA CGTGGCGGGCGAATACCCCGGCCTGAACCTGGCCTTCTGGGCGATACGGGGCTAA Protein sequence : MSWNNRVIWSEGMFIGTQHFQQHDRYLEALIDARSRPLSAAGWGFAELQLDIGLLAQGKLAIVSARGLLPDGTPFNIPQD DVAPEPLDIPDDLRDGVIYLALPLRRAGVRDTVEAGEALGGARYRGQVREVRDDNAAFESRVPVMVGERALRLLTAADGL QEYAVLGVARVREKRADRALVLDEQYIPPLLDVAASAPLAAFRGELLGLLHQRGEALAGRVVASSAGGASEIADFMLLQL VNRAQPLFAHLAQMQPLHPERLYSELLALAGEFATFSNAARRPLEFPPYIHDDLQASFTPVMQALREALSMLIDSKAVAI PIVEKAYGVHVAMLADRSLLDSASFILVVRADMPAETLRGRFGQQSKIGSVEHIRDLVNLQLPGINLLPLPVAPRQIPFH AGSTYYELDRGSEHWKQLAHSGGFAFHVAGEYPGLNLAFWAIRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec25 | AAQ96719.1 | Aec25 | Not tested | AGI-1 | Protein | 1e-76 | 41 |
| aec25 | YP_851420.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 1e-76 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MDS_0016 | YP_004377799.1 | hypothetical protein | VFG2065 | Protein | 3e-164 | 76 |
| MDS_0016 | YP_004377799.1 | hypothetical protein | VFG2082 | Protein | 3e-93 | 44 |
