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Name : MDS_1583 (MDS_1583) Accession : YP_004379366.1 Strain : Pseudomonas mendocina NK-01 Genome accession: NC_015410 Putative virulence/resistance : Resistance Product : arsenite-antimonite efflux pump ArsB Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1055 EC number : - Position : 1729157 - 1730440 bp Length : 1284 bp Strand : - Note : - DNA sequence : ATGCTGATCGCCGTTGCCATCTTCCTGTTCACCCTGATCCTGGTCATCTGGCAACCCAGAGGCCTCGGCGTTGGCTGGAG CGCCTCGCTCGGCGCCGTGCTGGCCCTGGCCGCCGGCGTGGTCAGCCTGGCCGACATCCCTACCGTGTGGAATATCGTGT GGAATGCCACGGCGACCTTCATCGCCGTGATCATCATCAGCCTGCTGCTCGATGAGGCCGGCTTCTTCGAATGGGCGGCG CTGCACGTGGCGCGCTGGGCCAACGGCAGCGGCGCGCGTCTGTTCGCCTTCAGCATCCTGCTTGGCGCGGCGGTGTCGGC GCTGTTCGCCAACGACGGCGCGGCGTTGATCCTCACCCCCATCGTGATCTCTATGTTGCTGGCGCTGCGCTTCTCGCCGG CCTCGACCCTGGCCTTCGTCATGGCCGCCGGCTTTATCGCCGACACCGCCAGCCTGCCGCTGGTGGTGTCGAACCTGGTC AACATCGTCTCGGCCGACTACTTCGACATCGGCTTCGGCGCCTACGCGGCGGTGATGGTGCCGGTGAACCTGGTCAGCGT CGCCGCCACCCTGCTGGTGCTGTGGCTGTTCTTCCGCCGCGACATTCCGGCGCGCTACGAGGTGGCGGCGCTGCAGGCGC CGAGCCAGGCGATCCGCGACCTCAGCACCTTCAAGGTCGGTTGGGCGGTGCTGCTGGCGTTGCTGGTCGGGCTGTTCGCC CTGGAGCCACTGGGCATCCCCATTAGCGCGGTGGCGGCAGCCTGCGCCGCACTGCTGTTCGCGGTCGCCGCGCGTGGCAA GCGCATCGCCACCGGCAAGGTGCTGCGCGAGGCGCCCTGGCAGGTGGTGATCTTCTCCCTCGGCATGTACCTGGTGGTGT ACGGCCTGAGCAATGCCGGCCTGACCGCCGAGCTGACGCGCCTGCTCGACGCCTTCGCCGGCTACGGCATCTGGGGCGCG GCGCTGGGCACCGGCCTGCTCAGCGCGCTGCTGTCGTCGCTAATGAACAACATGCCCAGCGTGCTGATCGGCGCACTGGC CATCGACGCCAGCCAGACCAGCGGCGCAGTGCGTGAGGCGATGATCTACGCCAACGTGATCGGCTGCGACCTGGGGCCGA AGATCACCCCCATCGGCAGCCTGGCCACCCTGCTCTGGCTGCACGTACTGGCACGCAAGGGAATCCGCGTGACCTGGGGT TACTACTTCAAGGTCGGCATAGTGCTCACCCTGCCGGTGCTGCTGCTCACCCTTTCGGCCCTGGCCCTGCGCCTGAGCCT CTGA Protein sequence : MLIAVAIFLFTLILVIWQPRGLGVGWSASLGAVLALAAGVVSLADIPTVWNIVWNATATFIAVIIISLLLDEAGFFEWAA LHVARWANGSGARLFAFSILLGAAVSALFANDGAALILTPIVISMLLALRFSPASTLAFVMAAGFIADTASLPLVVSNLV NIVSADYFDIGFGAYAAVMVPVNLVSVAATLLVLWLFFRRDIPARYEVAALQAPSQAIRDLSTFKVGWAVLLALLVGLFA LEPLGIPISAVAAACAALLFAVAARGKRIATGKVLREAPWQVVIFSLGMYLVVYGLSNAGLTAELTRLLDAFAGYGIWGA ALGTGLLSALLSSLMNNMPSVLIGALAIDASQTSGAVREAMIYANVIGCDLGPKITPIGSLATLLWLHVLARKGIRVTWG YYFKVGIVLTLPVLLLTLSALALRLSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 3e-112 | 72 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 7e-88 | 55 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 2e-89 | 55 |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 5e-91 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| MDS_1583 | YP_004379366.1 | arsenite-antimonite efflux pump ArsB | BAC0031 | Protein | 1e-113 | 73 |
| MDS_1583 | YP_004379366.1 | arsenite-antimonite efflux pump ArsB | BAC0576 | Protein | 3e-113 | 72 |
| MDS_1583 | YP_004379366.1 | arsenite-antimonite efflux pump ArsB | BAC0578 | Protein | 1e-113 | 72 |
| MDS_1583 | YP_004379366.1 | arsenite-antimonite efflux pump ArsB | BAC0577 | Protein | 3e-108 | 71 |
| MDS_1583 | YP_004379366.1 | arsenite-antimonite efflux pump ArsB | BAC0575 | Protein | 1e-90 | 55 |
| MDS_1583 | YP_004379366.1 | arsenite-antimonite efflux pump ArsB | BAC0574 | Protein | 3e-90 | 55 |
