Gene Information

Name : MDS_0159 (MDS_0159)
Accession : YP_004377942.1
Strain : Pseudomonas mendocina NK-01
Genome accession: NC_015410
Putative virulence/resistance : Unknown
Product : cytochrome-c oxidase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0843
EC number : -
Position : 171419 - 173002 bp
Length : 1584 bp
Strand : +
Note : -

DNA sequence :
ATGAGTGCAGTGATCGACCACGGTCATACTGACCACCACCATGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCTGACCAC
CAACCACAAGGACATCGGTACGATGTATCTGTGGTTCAGCTTCTGCATGTTCCTGCTGGGTGGCTCGATGGCCATGGTCA
TCCGTGCCGAGCTGTTCCAGCCGGGTTTGCAGATCGTGCAGCCGGAATTCTTCAACCAGATGACCACCATGCACGGCCTG
ATCATGGTCTTCGGCGCGGTGATGCCGGCGTTCGTCGGCCTGGCCAACTGGATGATCCCGCTGATGATCGGCGCACCGGA
CATGGCGCTGCCGCGGATGAACAACTTCAGCTTCTGGCTGTTGCCGGCGGCCTTCGGCTTGCTGGTCTCGACGTTGTTCA
TGGAAGGCGGCGGGCCGAACTTCGGCTGGACCTTCTACGCGCCGCTGTCGACCACCTACGGGCCGGAGAGCACGACCTTC
TTCATCTTCGCCATCCACCTGATGGGCATCAGTTCGATCATGGGGGCAATCAACGTGGTCGCCACCATCCTCAACCTGCG
CGCCCCGGGCATGACCCTGATGAAGATGCCGTTGTTCGTCTGGACCTGGCTGATCACCGCCTTCCTGCTGATCGCAGTGA
TGCCGGTACTAGCCGGTTGCGTGACCATGATGCTGATGGACATCCACTTCGGCACCAGCTTCTTCAACGCCGCCGGCGGC
GGGGACCCGGTGCTGTTCCAGCACGTGTTCTGGTTCTTCGGCCATCCCGAAGTGTACATCATGATCCTGCCCGCCTTCGG
TGCGGTCAGCTCGATCATCCCGGCCTTCGCGCGCAAGCCGCTGTTCGGCTACACCTCGATGGTCTACGCCACTGCAGCGA
TCGCCTTCCTGTCGTTCATCGTCTGGGCGCACCACATGTTCACCGTTGGCATCCCGCTGACCGGCGAGCTGTTCTTCATG
TACGCCACGATGCTGATCGCCGTGCCCACCGGGGTGAAGGTGTTCAACTGGGCCAGCACCATGTGGCAGGGTTCGATGAC
CTTCGAAGCACCGATGCTGTTCTCGGTGGCCTTCGTCATTCTCTTCACCATCGGAGGTTTCTCCGGGTTGATGCTGGCCA
TCGCGCCGTCGGACTTCCAGTACCACGACACCTATTTCGTTGTAGCGCACTTCCACTACGTGCTGGTGCCGGGTGCGATC
TTCGGCATCTTCGCCTCGGCCTACTACTGGCTGCCGAAGTGGACCGGCCACATGTACGACGAAACCCTGGCCAAGCTGCA
TTTCTGGATGAGTTTCATCGGCATGAACCTGGCGTTCTTCCCGATGCACTTCGTCGGCCTGGCCGGCATGCCGCGGCGTA
TCCCCGACTACAACATGATGTTCGCCAATTTCAACATGGTCTCCAGCATCGGCGCCTTCATGTTCGGGGCGACTCAGCTG
CTGTTTTTGTTCATCGTCATCAAGTGCATTCGCAGCGGCAAGCCGGCACCGGCCAAGCCCTGGGACGGTGCTGAAGGTCT
GGAGTGGACGGTGCCGTCACCGGCGCCCTATCACACCTTCAGCACGCCGCCGGAAGTGAAATAG

Protein sequence :
MSAVIDHGHTDHHHGPAKGLMRWVLTTNHKDIGTMYLWFSFCMFLLGGSMAMVIRAELFQPGLQIVQPEFFNQMTTMHGL
IMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPAAFGLLVSTLFMEGGGPNFGWTFYAPLSTTYGPESTTF
FIFAIHLMGISSIMGAINVVATILNLRAPGMTLMKMPLFVWTWLITAFLLIAVMPVLAGCVTMMLMDIHFGTSFFNAAGG
GDPVLFQHVFWFFGHPEVYIMILPAFGAVSSIIPAFARKPLFGYTSMVYATAAIAFLSFIVWAHHMFTVGIPLTGELFFM
YATMLIAVPTGVKVFNWASTMWQGSMTFEAPMLFSVAFVILFTIGGFSGLMLAIAPSDFQYHDTYFVVAHFHYVLVPGAI
FGIFASAYYWLPKWTGHMYDETLAKLHFWMSFIGMNLAFFPMHFVGLAGMPRRIPDYNMMFANFNMVSSIGAFMFGATQL
LFLFIVIKCIRSGKPAPAKPWDGAEGLEWTVPSPAPYHTFSTPPEVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1478 YP_001800872.1 cytochrome c oxidase subunit I Not tested Not named Protein 2e-101 46