Gene Information

Name : MDS_1557 (MDS_1557)
Accession : YP_004379340.1
Strain : Pseudomonas mendocina NK-01
Genome accession: NC_015410
Putative virulence/resistance : Unknown
Product : putative alanine racemase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 1699206 - 1700015 bp
Length : 810 bp
Strand : +
Note : -

DNA sequence :
ATGCCGGCCGATCATTCCACCGCCACCCGTCACGACCACCACGGGCGTTATCCCGAGGCCGCCTCGGTGGAGGATTTTCG
TCACAACCTGGCCGAGGTGCAGCGCCGCATCGAGGCGGCCTGCCAGCGCGTCGGCCGTGACCCGGCCACGGTGCGCCTGC
TGCCGGTGAGCAAGACCAAGCCCGAGGCCAGCCTGCGCCTGGCCTATGCCGCCGGCTGCCGGATGCTCGGCGAGAACAAG
GTGCAGGAGGCCCATGGCAAGTGGCAGTCCATGCAGGATCTGGGCGATCTGCAATGGTCGGTGATCGGCCATCTGCAGAC
CAACAAGGCCAAGCTGGTGGCGCGCTTCGCCACGGAATTCCAGGCCCTGGACAGCCTGCGCCTGGCCGAGGCGCTGGATC
GCCGCCTGCAGGTCGAAGGCCGTGCGTTGGACGTGTTCGTGCAGGTCAACACCTCTGGCGAGGCCAGCAAGTATGGCCTC
GCCCCGGAGGATGTAGCGGCCTTCGTCCAGGCACTGCCGGCATTTTCCGCTTTGCGGGTGCGCGGGCTGATGACCCTGGC
GCTGTTCTCCTGCGAGGCCGAGCGGGTGCGCCAGTGTTTCGTGCGCCTGCGTGAGCTGCGTGACCGATTGCGCCAGGAGG
CGCCGTCTGGAATCGAGCTGGAGGCATTGTCGATGGGCATGTCCGGGGATTTCGAAATCGCCATCGAGGAGGGTGCCACG
GTGGTGCGCGTCGGCCAGGCGATCTTCGGCGCCCGCGCGCTGCCGGACAGCCACTACTGGCCGGGCGCCGTGCCCGCTGA
ACAACCCTGA

Protein sequence :
MPADHSTATRHDHHGRYPEAASVEDFRHNLAEVQRRIEAACQRVGRDPATVRLLPVSKTKPEASLRLAYAAGCRMLGENK
VQEAHGKWQSMQDLGDLQWSVIGHLQTNKAKLVARFATEFQALDSLRLAEALDRRLQVEGRALDVFVQVNTSGEASKYGL
APEDVAAFVQALPAFSALRVRGLMTLALFSCEAERVRQCFVRLRELRDRLRQEAPSGIELEALSMGMSGDFEIAIEEGAT
VVRVGQAIFGARALPDSHYWPGAVPAEQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-40 54
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-40 54
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-40 54
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 1e-40 54