Gene Information

Name : MDS_1097 (MDS_1097)
Accession : YP_004378880.1
Strain : Pseudomonas mendocina NK-01
Genome accession: NC_015410
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1202370 - 1203362 bp
Length : 993 bp
Strand : -
Note : -

DNA sequence :
ATGACGGCCAGGAAAGACGGCAACACCTGGACCGCTGACTTCTACGAAAACGGTCGCTCGGGTCGTCGTATTCGCAAGAA
GGGTTTCAAAACAAAGGCCGCAGCCCAGCGCTATGAATCGGAGTTCTTCGCCAGCCTCAACGCTACCGGCCGGCCGCTCG
ATGATCGCCTGTCGGATCTGGTGACGCTTTGGCATGACCTGCACGGTTGCTCGCTCAAGGATGCCAAGCATCGTCTTGCA
CGAACCCTTGCCACTGTCGAACGCCTCGGCAATCCGATGGCCTCCAGCTTCGATGCCCTCGCCTGGGCACGCTATCGCCA
GACACGCCTCAAGGACGTCAGTCCGCACACCGTCAACCATGAACAGCGTTACCTGTCGGCGGTCTTCTCCGAACTGATCC
GCCTGGGTGCCTGGGTCGGCAACAACCCACTGGCCAAGGTTCGCCAGATCAAGACCGACCAGACCGAGCTGACGTTTCTG
ACCTTGCAGCAGGTCGAACAACTGCTGGAAGAGTGCAAGCGCTCGACCAACAACCATACCTACCCTGTTGCGCTGATCTG
CTTGGCCACAGGTGCCCGATGGGACGAAGCGGAATCCCTGCCACGGGGTGCGTTGTTCGGCGGTAAGGCCCACTTTCACC
GGACCAAAAACCGCCAGTCCCGGTCGGTGCCGATCCCCAAAGAGGTCGAAGAGATTGCGTTAAAGGTGGGAATGCCGGGG
AATGGTCGGCTGTTCATGCCTTGCCGGTCGGCATTTCGATCTGCTTACCAGCGTTGCGGCTTCCACACACCTGGCCAGAT
GACTCACATCCTCCGTCACACCTTCGCCAGCCATTACATGATGGGCGGTGGTGACATCCTGGGTCTGCAACGCATCCTCG
GGCACTCGACCATAACGATGACCATGCGCTATGCACACCTGTCGCCTGATCATCTGGAGTCGGCGCTTAGGCTCTCTCCC
CTCGCTCAAGCGGGCTGCTTTCCAAGCAGGTAG

Protein sequence :
MTARKDGNTWTADFYENGRSGRRIRKKGFKTKAAAQRYESEFFASLNATGRPLDDRLSDLVTLWHDLHGCSLKDAKHRLA
RTLATVERLGNPMASSFDALAWARYRQTRLKDVSPHTVNHEQRYLSAVFSELIRLGAWVGNNPLAKVRQIKTDQTELTFL
TLQQVEQLLEECKRSTNNHTYPVALICLATGARWDEAESLPRGALFGGKAHFHRTKNRQSRSVPIPKEVEEIALKVGMPG
NGRLFMPCRSAFRSAYQRCGFHTPGQMTHILRHTFASHYMMGGGDILGLQRILGHSTITMTMRYAHLSPDHLESALRLSP
LAQAGCFPSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4645 NP_458725.1 phage integrase Not tested SPI-7 Protein 4e-49 42
t4338 NP_807932.1 phage integrase Not tested SPI-7 Protein 4e-49 42