Gene Information

Name : VAB18032_30359 (VAB18032_30359)
Accession : YP_004377783.1
Strain :
Genome accession: NC_015409
Putative virulence/resistance : Unknown
Product : resolvase domain-containing protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 56880 - 57575 bp
Length : 696 bp
Strand : -
Note : COG1961 Site-specific recombinases, DNA invertase Pin homologs

DNA sequence :
ATGGACGGCGTGACCGTCACCCCCGCGCCCACCGAAGGCGATCTACTGCTGCCTACCCCGCTCGCCGGCGTGCTCGTCGG
CTACGGCCGCGTCTCTACCCGCGAGCAGAACCTCGCCCGGCAGCAAGCCGCGCTCACTGCGGCCGGCTGCGCGAAGTGCT
TCTTCGACAAGGCCAGTGGCAAGAACGCCGACCGGCCCGAGCTGACCAAGGTGTTCGAGTACATCCGACCCGGCGACGCG
CTCACCGTCGTCTCCCTCGACCGGCTCGGCCGCTCCCTGGAAGACCTGATCGGCATCGTCGGCCGACTCAAGCGCCATGG
CGTCGGCTTCCAGTCCCTGCACGAGAAGCTTGACACCACCACCCCCGGCGGGATGTTCGTCTTCCACGTCTTCGCCGCCC
TGGCCGAGTTCATCCGCACCATCATCGTGGCCAACACCAACGAGGGCCTGGCCGCCGCCCGCGCCGCCGGCCAGCGCCTC
GGCCGGCCGCCGGCAATGACCCCGGAGAAGGTCGCGTACGCGCTGCAACTGCTCAGCGAGCCCGACCGCACCATGACCTC
GATCGCCAAGTTGCTCGGCGTCTCCCGCAGCACCCTCTACACCGCGCTGCCCGAACTACAGGCCGCCAAGCGCGCCGGCG
GCGGGCCGGACGACGTCCTCGCCCAGCGGCAGCCGGACTCCCGCCCCGGACGGTAA

Protein sequence :
MDGVTVTPAPTEGDLLLPTPLAGVLVGYGRVSTREQNLARQQAALTAAGCAKCFFDKASGKNADRPELTKVFEYIRPGDA
LTVVSLDRLGRSLEDLIGIVGRLKRHGVGFQSLHEKLDTTTPGGMFVFHVFAALAEFIRTIIVANTNEGLAAARAAGQRL
GRPPAMTPEKVAYALQLLSEPDRTMTSIAKLLGVSRSTLYTALPELQAAKRAGGGPDDVLAQRQPDSRPGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
res AGK06966.1 resolvase Not tested SGI1 Protein 1e-28 49
res AGK07012.1 resolvase Not tested SGI1 Protein 1e-28 49
res AAK02044.1 resolvase Not tested SGI1 Protein 1e-28 49
res AGK07070.1 resolvase Not tested SGI1 Protein 1e-28 49
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 1e-28 49
res AGF34985.1 resolvase Not tested SGI1 Protein 1e-28 49
res AGF35025.1 resolvase Not tested SGI1 Protein 1e-28 49
res AGF35059.1 resolvase Not tested SGI1 Protein 1e-28 49
res AGK06929.1 resolvase Not tested SGI1 Protein 1e-28 49
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 2e-25 47
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 2e-18 43
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 3e-18 43
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 3e-18 43
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 3e-25 42
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 7e-26 42
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 7e-26 42