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Name : kdsB (G5S_0905) Accession : YP_004377545.1 Strain : Chlamydophila pecorum E58 Genome accession: NC_015408 Putative virulence/resistance : Virulence Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1212 EC number : 2.7.7.38 Position : 883957 - 884739 bp Length : 783 bp Strand : - Note : - DNA sequence : GTGATTTTTACGCGTGCTATGAGTGGCCAACGAATTCAGGGTAAGCGGGTTGGGGTTTTGCCTGCACGATGGGGAAGCTC TCGTTTCCCAGGAAAACCATTATCTGAAATTCTTGGAAAATCTTTAATTCGAAGGGCTTATGAAAACGCTGCGAGTAGCA CTTCTCTTGATGCTGTGGTTGTTGCAACAGAAGATCCTCGTATTATGGAGCATGTTCATAGTTTCGGAGGGTGCTGTGTT TTAACTAGCCCAGACTGTCTTAACGGTACAGAGCGCACTGCTGAGGTTGCCGAAAGGTATCTTAATGAAGCAGAAATTAT CGTGAATATTCAAGGGGATGAGCCTTGTTTAGCCCCAAGCGTAATAGATGCTTTAATTGGTAAGTTGGATGAGTGCCCCG AGGCAAATGTAGTGACTCCTGTAGCAATAAGTACGGATCCTGAGGAGATTTTTACGGAAAAAAAAGTAAAGTGTGTCTTT GATCAGCAAGGAAAAGCTTTATATTTTAGCCGGAGTCCGATTCCTTGTGTATATAAGAAGCCTGCTCCTAGATATTTGCA TATTGGGGTATATGCATTTAGAAAAGAATTTCTTTTTCAATATGTGCGGCTACTTCCGACTGCTTTAAATGAAGCAGAAG ATCTTGAGCAATTGCGCATTCTAGAGTCTGGAGGGCACATATATGTTTGTGTCGTCGAAGCTAAAAGCCCTTCTGTAGAT TATCCTGAAGATATAACAAAGGTGGAAAAATACATCTCATGCCTTTCAAATGCATCTTTTTAA Protein sequence : MIFTRAMSGQRIQGKRVGVLPARWGSSRFPGKPLSEILGKSLIRRAYENAASSTSLDAVVVATEDPRIMEHVHSFGGCCV LTSPDCLNGTERTAEVAERYLNEAEIIVNIQGDEPCLAPSVIDALIGKLDECPEANVVTPVAISTDPEEIFTEKKVKCVF DQQGKALYFSRSPIPCVYKKPAPRYLHIGVYAFRKEFLFQYVRLLPTALNEAEDLEQLRILESGGHIYVCVVEAKSPSVD YPEDITKVEKYISCLSNASF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsU | AAZ04469.1 | CMP-KDO synthetase | Virulence | PAI I APEC-O1 | Protein | 8e-35 | 42 |
| kpsU | CAE85213.1 | KpsU protein | Virulence | PAI V 536 | Protein | 7e-36 | 42 |
| kpsU | YP_854332.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | Not tested | PAI I APEC-O1 | Protein | 1e-34 | 42 |
