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Name : G5S_0694 (G5S_0694) Accession : YP_004377350.1 Strain : Chlamydophila pecorum E58 Genome accession: NC_015408 Putative virulence/resistance : Virulence Product : endopeptidase Clp ATP-binding chain clpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : 3.4.21.- Position : 690071 - 692614 bp Length : 2544 bp Strand : - Note : - DNA sequence : ATGTTTGAGAAGTTTACTAATAGAGCTAAGCAAGTTATCAAATTAGCTAAAAAAGAAGCCCAGCGTTTAAATCACAACTA TCTAGGGACTGAGCATATTTTGCTAGGACTGCTAAAATTAGGCCAAGGCGTAGCTGTAAATGTCTTACGTAACCTCGGGA TAGATTTCGATATTGCTCGACAAGAAGTAGAACGCTTAATCGGCTATGGACCTGAAATCCAAGTGTACGGAGATCCCGCG CTTACAGGAAGAGTAAAAAAATCTTTTGAATCTGCAAATGAAGAAGCAGGGATTTTAGAACATAACTATGTTGGAACGGA ACATTTACTTTTAGGAATTTTAAATCAAACAGATGGTGTAGCGCTTCAAGTATTAGAAAACCTCCGCATTGATCCTAGAG ATGTCCGTAAAGAAATTCTTAAAGAGTTAGAAACTTTTAATCTTCAGCTTCCTCCTTCTTCCTCTTCTTCCTCCTCCTCA AGGGGAAGCTCTTCCTCCTCCTCGAAGTCTCCTTTAGGCCATACTTTAGGCGTAGATAAGAGCGAGAAATTATCTGCATT AAAAGCTTATGGCTATGACTTAACAGAGATGTTTCGTGAGTCTAAATTAGATCCTGTGATTGGGCGTTCTTCTGAGGTGG AAAGGTTAATTTTGATTCTTTGCCGAAGAAGGAAAAACAACCCTGTACTCATTGGAGAAGCTGGTGTAGGGAAAACTGCC ATAGTGGAAGGTTTAGCACAAAAGATTATTTCCAATGAGGTCCCAGAAGCTTTACGTAAAAAGCGTTTAATCACTTTAGA TTTAGCATTGATGATTGCGGGAACAAAATACCGAGGGCAGTTTGAAGAGCGCATTAAAGCAGTAATGGATGAGGTTCGCA AGCATGGAAACATCCTCCTCTTTATTGATGAGCTCCATACAATTGTTGGAGCTGGAGCTGCAGAAGGAGCTATTGATGCT TCAAACATCTTAAAGCCAGCATTAGCGCGAGGGGAAATTCAATGTATCGGAGCTACAACTATTGATGAGTACCGTAAGCA TATAGAAAAGGACGCTGCTTTAGAGCGTCGTTTCCAGAAGATTATTGTTCAGCCTCCAAGCGTAGATGAAACTATTGAGA TCCTCCGAGGTCTCAAGAAAAAATACGAAGAACACCATAATGTCTTTATTACAGAAGAAGCATTAAAGGCTGCAGCTACT CTTTCAGACCAATATGTCCATGGGAGATTCCTTCCTGATAAAGCCATAGACCTCTTAGATGAAGCTGGTGCTCGTGTACG AGTCAATACGATGGGCCAACCTACAGAGTTAATGAAGCTCGAAGCGGATATTGAAAATACACGAATCGCCAAAGAACAAG CAATAGGAACTCAAGAATACGAAAAAGCAGCGAGTCTTCGTGATGAAGAGAAAAAACTCCGGGAGCGCCTGCAAACCATG AAGCTTGAGTGGGAAAACCATAAGGAAGAGCACCAGGTTCCTGTAGATGAAGAAGCTGTTGCTTCTGTGGTTTCCTTACA AACAGGTATCCCCTCAGCGAGACTTACAGAAGCAGAAAGTGAGAAGCTGTTAAAATTAGAGCACACCCTCCAGCAAAAAA TTATTGGCCAAAACGATGCAGTTTCTAGCATTTGCCGAGCAATCCGCCGTTCCAGGACAGGAATTAAAGATCCCAATCGC CCTACAGGTTCTTTCCTTTTCCTTGGTCCTACAGGGGTAGGGAAAACCTTATTAGCACAGCAAATTGCCATTGAGATGTT TGGGGGAGAAGATGCGTTAATTCAAGTGGACATGTCAGAGTACATGGAGAAATTTGCTGCGACAAAAATGATGGGCTCCC CTCCAGGGTACGTCGGCCATGAAGAAGGTGGCCACCTAACAGAGCAGGTCCGACGTCGTCCTTACTGCGTCGTTCTCTTT GATGAAATCGAAAAGGCCCACCCCGACATTATGGATTTGATGCTTCAAATTCTAGAGCAAGGCCGCCTTACAGACTCTTT TGGACGTAAAGTAGATTTCCGTCATGCCATCATCATCATGACTTCTAACTTAGGTGCAGATCTAATTAAGAAAAGCGGGG AAATTGGCTTTGGGTTCCGCTCCCCTATGGATTACAAGGTGATCCAAGAAAAAATCGAAAATGCTGTGAAGAAGCATCTT AAGCCAGAATTTATCAACCGTTTAGATGAAAGTGTGATTTTCCGTCCTTTAGAGAAAGATTCGCTCTCCCAAATTATTCA TCTAGAAATTAATAAGCTCGATACACGTCTGAAAAACTACCAGATGGCTTTAGATATCCCAGATTCTGTAATTTCCTTCC TTGTTACGAAAGGTCATTCTCCAGAAATGGGAGCACGCCCTTTACGTCGGGTGATCGAGCAGTACCTTGAAGATCCTCTA GCAGAATTACTTCTTAAAGAGTCTTGCCGTCAAGAAGCGCGAAAACTCCGCGCCACACTGGTTGAAGATCGCGTTACCTT TGAAAAAGAAGAGAACGCGCATACTGAAGAAGTTTCCGTCTCTACACAAAATATGGATTCATAG Protein sequence : MFEKFTNRAKQVIKLAKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRNLGIDFDIARQEVERLIGYGPEIQVYGDPA LTGRVKKSFESANEEAGILEHNYVGTEHLLLGILNQTDGVALQVLENLRIDPRDVRKEILKELETFNLQLPPSSSSSSSS RGSSSSSSKSPLGHTLGVDKSEKLSALKAYGYDLTEMFRESKLDPVIGRSSEVERLILILCRRRKNNPVLIGEAGVGKTA IVEGLAQKIISNEVPEALRKKRLITLDLALMIAGTKYRGQFEERIKAVMDEVRKHGNILLFIDELHTIVGAGAAEGAIDA SNILKPALARGEIQCIGATTIDEYRKHIEKDAALERRFQKIIVQPPSVDETIEILRGLKKKYEEHHNVFITEEALKAAAT LSDQYVHGRFLPDKAIDLLDEAGARVRVNTMGQPTELMKLEADIENTRIAKEQAIGTQEYEKAASLRDEEKKLRERLQTM KLEWENHKEEHQVPVDEEAVASVVSLQTGIPSARLTEAESEKLLKLEHTLQQKIIGQNDAVSSICRAIRRSRTGIKDPNR PTGSFLFLGPTGVGKTLLAQQIAIEMFGGEDALIQVDMSEYMEKFAATKMMGSPPGYVGHEEGGHLTEQVRRRPYCVVLF DEIEKAHPDIMDLMLQILEQGRLTDSFGRKVDFRHAIIIMTSNLGADLIKKSGEIGFGFRSPMDYKVIQEKIENAVKKHL KPEFINRLDESVIFRPLEKDSLSQIIHLEINKLDTRLKNYQMALDIPDSVISFLVTKGHSPEMGARPLRRVIEQYLEDPL AELLLKESCRQEARKLRATLVEDRVTFEKEENAHTEEVSVSTQNMDS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| G5S_0694 | YP_004377350.1 | endopeptidase Clp ATP-binding chain clpC | VFG0079 | Protein | 0.0 | 51 |
| G5S_0694 | YP_004377350.1 | endopeptidase Clp ATP-binding chain clpC | VFG0080 | Protein | 2e-147 | 50 |
