Gene Information

Name : rrp (G5S_0469)
Accession : YP_004377160.1
Strain : Chlamydophila pecorum E58
Genome accession: NC_015408
Putative virulence/resistance : Virulence
Product : acetate metabolism regulatory protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 462794 - 463954 bp
Length : 1161 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTATAGAGCATATTCTTATTATAGACGATGATCCTCTTCTTCAAGAGTTTCTCTTTGAGCTCTTATCCTCCCGAGG
CTATTTCCCCTCAGTAGCTGAAAATATCTCCATAGCGAAGAAAAAGATCAAAGCAAACCGTTATGATCTTATTATTTCCG
ATATGAACATGCCCGATGGAACGGGAATGGATGTGATTCATCTCACAAAGCAGCGCTCTCCAAGAACGCCGATTCTTATG
ATTACAGCCTATGGCTCCATAGAAAACGCAGTGGAAGCCATGCGCCAGGGGGCCTTTAATTACCTAACAAAGCCGTTCTC
CTCAGAAGCCCTCCTTGCCTTCATCTCAAAAGCCGAAGAGCTACAAAACCTTGTTCAAGAAAATCTCTTTTTAGCCTCCC
AAACGACAACGAGCTCCTACCCTCTCATTGCCGAAAGCCAAGTGATGAAAAATCTTCTTGCCAAAGCAAAGAGAGCCGCC
CAAAGCTCCGCGAATCTCTTTATTCACGGGGAATCAGGATGCGGAAAAGAAATCCTCTCATTTTTTATTCATACGAACTC
CCCAAGAGCACACCGCCCCTATATCAAAGTCAACTGCGCAGCAATCCCAGAAACACTCTTAGAATCTGAATTCTTCGGAC
ACGAAAAAGGTGCTTTTACAGGAGCAACAACAAAAAAAGCCGGTCGCTTTGAGCTGGCTCATAAAGGAACTCTCCTCCTT
GATGAAATTACAGAGATCCCCCTGAACCTCCAAGCCAAACTCCTAAGAGCTATCCAAGAAAAAGAATTTGAACATCTCGG
AGGAACAAAAACTGTTTCCGTAGATGTTCGCATCCTCGCCACCTCTAACCGCGACCTTAAAGAGGCCATCCAAGAGAAAA
TCTTCCGTCAAGATCTCTATTACCGCCTGAATGTGATCCCTCTCTACCTCCCTCCATTAAGAGAACGTAAAGATGACATC
CTACCCCTAGCAACCTACTTCCTAAAGAAATTCTGCCACCAAAATAATGCGCCAGCAAAGACTCTCTCCTCAGAAGCAAA
AAAACTCCTTATCGAATACCCTTGGCCCGGGAATATCCGCGAGCTCTCCAATGTTTTGGAGCGCGCTGTAATCTTAGAAA
GCAGCACTTCCCTGACGAAGGAAATGCTCTCCTTAAACTAA

Protein sequence : 
MSIEHILIIDDDPLLQEFLFELLSSRGYFPSVAENISIAKKKIKANRYDLIISDMNMPDGTGMDVIHLTKQRSPRTPILM
ITAYGSIENAVEAMRQGAFNYLTKPFSSEALLAFISKAEELQNLVQENLFLASQTTTSSYPLIAESQVMKNLLAKAKRAA
QSSANLFIHGESGCGKEILSFFIHTNSPRAHRPYIKVNCAAIPETLLESEFFGHEKGAFTGATTKKAGRFELAHKGTLLL
DEITEIPLNLQAKLLRAIQEKEFEHLGGTKTVSVDVRILATSNRDLKEAIQEKIFRQDLYYRLNVIPLYLPPLRERKDDI
LPLATYFLKKFCHQNNAPAKTLSSEAKKLLIEYPWPGNIRELSNVLERAVILESSTSLTKEMLSLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 2e-64 42
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 2e-64 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
rrp YP_004377160.1 acetate metabolism regulatory protein BAC0467 Protein 3e-75 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
rrp YP_004377160.1 acetate metabolism regulatory protein VFG1249 Protein 1e-78 48
rrp YP_004377160.1 acetate metabolism regulatory protein VFG1214 Protein 1e-72 45
rrp YP_004377160.1 acetate metabolism regulatory protein VFG0116 Protein 4e-66 42