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Name : serS (G5S_0171) Accession : YP_004376892.1 Strain : Chlamydophila pecorum E58 Genome accession: NC_015408 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 175533 - 176807 bp Length : 1275 bp Strand : + Note : - DNA sequence : ATGTTGGATATAAAGATTATACGCAAGGAACCTGAGAAAAGTGAGCTGCGGCTTCGGAGGAAAGATTCTAATATCTCTTT ACAGCCTATCCTTACTTTGGACAAAACTGTCCGTGAGTTGAAAACACAAGCAGAAGCGTTGCAAGCCCGTAGGCGTGCGC TTTCTGAAGAGATCCGAAAATTAAAAGCACAAGGGGAAGATGCTCAAGCACATATTCAAGAAGCCTCCAAAGTTGCTTCT CAGCAGAAGGATTTAGAGGAACGGCTCCAAGAAAACGAAGCTCTCCTTCACGACGAGATGTCCCGACTTCCTAACTATCC TGCTGAGGACGTCCCCGATGCTCCAGATAAATCTGGGAACCGCGTTATTAAAAGTTTCGGCACACCAAGAGAATTTTCCT TTCCTCCTAAGAACCACCTAGAACTCAATAAAGCACTAGACATCTTGGATTTCAAATCCCCGGCAAAAACTACCGGTTCA GGATGGCCTGCATATAAAAACTTTGGAGTACTTTTAGAGTGGGCTTTACTAACCTATCTTCTCCAAAAGCAACGTGCCCA TGGCTTTGAGCTCTGGCTTCCTCCTCTCTTAGTAAAAAAAGAGATTTTATACGGCTCTGGGCAAATCCCAAAGTTTGATG GGCAGTATTACCGCGTAGAGGATGGAGACCACCACCTCTATCTTATTCCTACAGCAGAAGTTGTCCTGAATGGGTTTCAC TCTCAAGAGCTTCTCAATGAAAAAGATCTCCCCTTATATTACGCTGCATGTACCCCGTGTTTCCGCAGAGAAGCTGGAGC TGCGGGGTCTCAAGAACGCGGCCTCGTTCGGGTACATCAGTTCCATAAAGTCGAGATGTTCGCGTTTACTACCCCTGATC AGGAGGATTCTGCTTATACTAAAATGCTCGACATTGTTGAGGAGATCCTTATCGAACTGGAGCTTCCCTATCGCTTATCT CTTCTTTCCACGGGAGATATGTCTTTCACAGCTTCAAAAACTATCGATGCAGAAGTATGGCTCCCTGGGCAAAATGCATT TTATGAGGTCTCTTCGATTTCAAAATGCTCTGATTTCCAATCCCGACGTTCAGGGACACGCTACAAAGATGCTCAAGGGA AGATGCATTTTGTCCATACCCTAAACGGCTCTGGATTAGCAACACCGCGTTTGCTTGTGGCAATTTTAGAAAATAACCAG CAGGAAGATGGTTCTGTAGTGATCCCAAAAGTTCTCCGAGCCTATTTAGGGAACCAAGAAAAGCTAGAACCTTAG Protein sequence : MLDIKIIRKEPEKSELRLRRKDSNISLQPILTLDKTVRELKTQAEALQARRRALSEEIRKLKAQGEDAQAHIQEASKVAS QQKDLEERLQENEALLHDEMSRLPNYPAEDVPDAPDKSGNRVIKSFGTPREFSFPPKNHLELNKALDILDFKSPAKTTGS GWPAYKNFGVLLEWALLTYLLQKQRAHGFELWLPPLLVKKEILYGSGQIPKFDGQYYRVEDGDHHLYLIPTAEVVLNGFH SQELLNEKDLPLYYAACTPCFRREAGAAGSQERGLVRVHQFHKVEMFAFTTPDQEDSAYTKMLDIVEEILIELELPYRLS LLSTGDMSFTASKTIDAEVWLPGQNAFYEVSSISKCSDFQSRRSGTRYKDAQGKMHFVHTLNGSGLATPRLLVAILENNQ QEDGSVVIPKVLRAYLGNQEKLEP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 8e-73 | 43 |
