Gene Information

Name : rplS (CAR_c09990)
Accession : YP_004374708.1
Strain : Carnobacterium sp. 17-4
Genome accession: NC_015391
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 1029850 - 1030197 bp
Length : 348 bp
Strand : +
Note : -

DNA sequence :
ATGAGTAATTTAATTGAATCAATCACTAACGAACAATTACGTGAAGACATCCCAGCTTTCCGTCCAGGAGATACTGTACG
TGTTCATGCTAAAATCGTTGAGGGTACTAGAGAACGTATCCAATTATTTGAAGGTGTTGTAATCAAACGCCGTGGTGCTG
GAGTTAGCGAAACTTACACAGTTCGTAAAATTTCTAATGGAATTGGCGTTGAACGTACATTCCCATTACACTCACCACGT
GTTGCTCAAATCGAAGTTGTTCGCTTTGGTAAAGTACGTCGTGCTAAATTGTACTACTTACGTGCATTACACGGTAAAGC
AGCTCGTATTAAAGAAATCCGTCGCTAA

Protein sequence :
MSNLIESITNEQLREDIPAFRPGDTVRVHAKIVEGTRERIQLFEGVVIKRRGAGVSETYTVRKISNGIGVERTFPLHSPR
VAQIEVVRFGKVRRAKLYYLRALHGKAARIKEIRR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 7e-42 79
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 1e-26 59