Gene Information

Name : ssbA (CAR_c00080)
Accession : YP_004373776.1
Strain : Carnobacterium sp. 17-4
Genome accession: NC_015391
Putative virulence/resistance : Unknown
Product : single-strand DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 9561 - 10094 bp
Length : 534 bp
Strand : +
Note : -

DNA sequence : 
GTGGATAATGTGATTAACAATGTTGTTTTAGTTGGAAGATTAACAAAAGATGCTGATTTAAGATACACTTCAAATGGCAC
AGCGGTAGCAACTTTTTCACTGGCTGTAAACAGACAGTTTACAAACCAAAAAGGTGAAAGAGATGCCGATTTTATCAACT
GTGTAATTTGGAGAAAGAGTGCTGAATCATTTGCAAACTTCACCAGAAAAGGTGCATTAGTAGGTGTAGAAGGCCGTATC
CAAACACGTTCTTATGATAATCAACAAGGGCAACGTGTATATGTTACAGAAGTAGTTGTTGAAACGTTCTCATTATTAGA
ATCAAAATCTAAAAATGACCAACGTAAAGATCAAAATGACTCTCAAGCTCAATCGGGATCATACGGTTCTCAACAAAAAC
CTTATAACAATAACACACAAAGTAATTCACAAGAAGCTCCCCGTAACCAACAATATCAAAATTTTGGAAACTCTGATCCT
TTTGAAAAGAGCGGACAACCGATTGATATTTCAGATGACGATTTACCATTCTAA

Protein sequence : 
MDNVINNVVLVGRLTKDADLRYTSNGTAVATFSLAVNRQFTNQKGERDADFINCVIWRKSAESFANFTRKGALVGVEGRI
QTRSYDNQQGQRVYVTEVVVETFSLLESKSKNDQRKDQNDSQAQSGSYGSQQKPYNNNTQSNSQEAPRNQQYQNFGNSDP
FEKSGQPIDISDDDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb-2 NP_814280.1 single-strand binding protein Not tested Not named Protein 2e-40 54
ef0020 AAM75226.1 EF0020 Not tested Not named Protein 1e-40 54
SAV1983 NP_372507.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-30 45
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 1e-30 45
SAUSA300_1958 YP_494609.1 single-strand binding protein Not tested ¥ÕSa3 Protein 1e-30 45
SAKOR_01963 YP_008492151.1 Single-strand DNA binding protein Not tested ¥ÕSa3 Protein 1e-30 45
MW1921 NP_646738.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 8e-30 45
SA1792 NP_375091.1 single-strand DNA-binding protein Not tested ¥ÕSa3 Protein 2e-30 45