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Name : clpE (CAR_c07710) Accession : YP_004374481.1 Strain : Carnobacterium sp. 17-4 Genome accession: NC_015391 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 798963 - 801152 bp Length : 2190 bp Strand : - Note : class III stress gene DNA sequence : ATGAATGGTCAAAAGGGTCAATTAGATGTTTGCCAAAATTGTTATCAACTTATTAAAAATGCACAAAATCGTGGAGAAAT TAGAAACAATCGCACACCACAAGACCCCTTTGGTTTTGGTAACTTAGATCAATTTTTCCGTTCGATGCAAAATGCACAAA ACAATAACTTCCAACAAAATAATCCTGACGTTCCTCCCACTCAAAATGGTTCAGGAGGTCAACCACCCATTAATAAGAAA CCTGGTCTTTTGGGTGAATATGGAACAAGTTTAACTGAAGCAGCTAGATCAGGTGCTATTGATCCAGTTATAGGGCGTGA CAAAGAAATTGAACGAGTGATTGAAATTCTAAACCGTCGTACTAAAAATAATCCTGTCTTAACCGGAGAGCCTGGTGTTG GTAAAACAGCTGTTGTTGAAGGCTTAGCACAAAAAATTGTTGACGGTGACGTTCCTCAAAAATTATTAGGTAAAGAAGTT ATTCGATTAGATGTCGCTTCATTAGTTCAAGGAACTGGTATTCGTGGACAATTCGAAGAACGTATGCAGCAATTAATGGA TGAATTAAAGAAAAATCCACAAATCATTTTATTTATTGATGAAGTTCATGAAATTGTTGGAGCCGGAAGTGCAGAAGGAA GTATGGATGCTGGAAATATGCTTAAACCAGCTCTTGCACGTGGTGAATTACAAATGGTTGGAGCAACAACTTTAAAAGAG TATCGTACAATTGAAAAAGACGCTGCATTAGAACGTCGTATGCAACCTGTACGTGTAAGCGAACCGTCTGTTGAAGAGAC CATTACCATTCTTAAAGGTTTGCAAAAGAAATATGAAGATTATCACCACGTTCATTACACAGATGAAGCAATCACAAGCG CCGTAAATCTTTCTAATCGTTATATTCAGGATCGTTTTTTGCCCGATAAAGCAATCGATCTATTAGATGAATCAGGTTCT AAAAAGAACCTAACAATACAAGTTGTCGATCCTAAACAACTTGAAGATAAAATCGCAGAAGCTGCTCAACAAAAACAATT AGCTTTACAGCAAGAAGATTATGAAAAAGCTGCTTTTTATCGTGATCAAGCTAAAAAATTCGCTACCATGCGTGATCAGC AAAAACCAGATTCAGATGAACCTACTGTAACGGAAGAAGATATGATTGAAATCATTGAAATGAAAACAAATATTCCAGTA GGCGAATTAAAAGAAAAAGAACAAGAACAATTGCGTAATCTAGGAGAAGATTTGAAGAAACACGTTATTGGACAAGATGA AGCAATTGAAAAAGTTTCTAGGGCTATACGTAGAAATCGAATAGGGTTTAATAGTAAAAATCGTCCAATCGGTTCTTTCC TTTTCGTTGGTCCTACAGGGGTCGGAAAAACTGAATTAGCTAAACAATTAGCACTAGAACTTTTCGGTAGTAAAGATGCT TATATCCGTTTTGATATGAGTGAATATATGGAGAAACATAGTGTCTCTAAGTTGATTGGTTCTCCTCCAGGATACATTGG CTATGATGAAGCAGGTCAGTTAACTGAAAAAGTTCGCCACAATCCTTACAGCCTCATTTTATTAGATGAAGTTGAAAAAG CTCATCCAGATGTTTTGCATATGTTCTTACAAATTCTGGACGATGGCAGATTAACCGATGCTCAAGGACGTACGGTGAGC TTTAAAGACACCATTATTATTATGACAAGTAACGCGGGTACTGGAAATGTAGAAGCAAGTGTTGGTTTTGGTGCTGCCGC TTCTGGTACTCAGAAATCTGTGTTAAATCATTTAAGTGATTACTTCAAACCCGAGTTTATTAACCGTTTTGATGGAATTG TTGAATTTAACTCACTTACAAAAGAAAACTTATTGTATATTGTAGATCTATTGATAGCAGATGTGAATAATATGCTCGAA CATCAAGGTATATCCATAGAAGTTGACCAGTCTGCTAAAGAAAAATTAGTAGAATTAGGTTATGATCCAAAATTAGGCGC TCGTCCTTTACGTCGTGTCATTCAAGAACAAATTGAAGATCGTATTGCTGATTTTTATCTTGATTACCCTTCTATAAAAA AATTAGTGGCAAAAACAGACCAAGAAGGAAATCTAATTGTAGAAGCAAAAGAACCTATTTTAGAAGAAACTATTGTTGAA GAAATTGAAGAACCAGAAACTGAAGATTAA Protein sequence : MNGQKGQLDVCQNCYQLIKNAQNRGEIRNNRTPQDPFGFGNLDQFFRSMQNAQNNNFQQNNPDVPPTQNGSGGQPPINKK PGLLGEYGTSLTEAARSGAIDPVIGRDKEIERVIEILNRRTKNNPVLTGEPGVGKTAVVEGLAQKIVDGDVPQKLLGKEV IRLDVASLVQGTGIRGQFEERMQQLMDELKKNPQIILFIDEVHEIVGAGSAEGSMDAGNMLKPALARGELQMVGATTLKE YRTIEKDAALERRMQPVRVSEPSVEETITILKGLQKKYEDYHHVHYTDEAITSAVNLSNRYIQDRFLPDKAIDLLDESGS KKNLTIQVVDPKQLEDKIAEAAQQKQLALQQEDYEKAAFYRDQAKKFATMRDQQKPDSDEPTVTEEDMIEIIEMKTNIPV GELKEKEQEQLRNLGEDLKKHVIGQDEAIEKVSRAIRRNRIGFNSKNRPIGSFLFVGPTGVGKTELAKQLALELFGSKDA YIRFDMSEYMEKHSVSKLIGSPPGYIGYDEAGQLTEKVRHNPYSLILLDEVEKAHPDVLHMFLQILDDGRLTDAQGRTVS FKDTIIIMTSNAGTGNVEASVGFGAAASGTQKSVLNHLSDYFKPEFINRFDGIVEFNSLTKENLLYIVDLLIADVNNMLE HQGISIEVDQSAKEKLVELGYDPKLGARPLRRVIQEQIEDRIADFYLDYPSIKKLVAKTDQEGNLIVEAKEPILEETIVE EIEEPETED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-152 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpE | YP_004374481.1 | ATP-dependent Clp protease | VFG0080 | Protein | 0.0 | 60 |
| clpE | YP_004374481.1 | ATP-dependent Clp protease | VFG0079 | Protein | 2e-156 | 52 |
