Gene Information

Name : yrhB (CAR_c05790)
Accession : YP_004374292.1
Strain : Carnobacterium sp. 17-4
Genome accession: NC_015391
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : 2.5.1.48
Position : 584462 - 585628 bp
Length : 1167 bp
Strand : +
Note : -

DNA sequence :
GTGTCAAAAATGAAAATGAAAACGAAGTTAATCCACGGTGGTATCAGTCATGATGAAGCAACAGGTTCGGTAAATGTCCC
CATTCACCAAACATCAACCTATAAACAAGAAAAAGTTGGCAAACACAAAGGGTATGAATATTCAAGAACAGGAAATCCTA
CTCGTTTTGCAGTAGAAGAATTAATCAAGGACTTAGAGGAAGGCGTTAGAGGTTTTGCTTTTGGATCAGGCTCAGCAGGG
ACACATACTGTGCTATCATTATTTTCTAAAGGAGATCATATCATTGTGGGAGATGATGTTTATGGAGGAACGTATCGCTT
AATGAATAAAGTACTCGTGCATCTTGGAATAACATTTACTACGGTAGATACAAGTGAATTAAGCACTATTGAACCAGCAA
TTCGTCCAGAAACTAAAGCAATTTTTTTAGAGACACCAACCAATCCTTTGCTAAAAATAACCGACATCGAGGCTGTAGCT
AAAATTGCAAAAGAGTCTAACTTGATAACTATTGTTGACAACACTTTTGCTACCCCTTATCATCAACGTCCACTTACACT
AGGAGCAGATATTGTTGTTCATAGTGCCTCTAAATACTTAGGCGGACATAGCGATATTGTTGCAGGATTAGTTACGACAA
ACAATGAAGAACTAGCTGATAAAATCGGCTTTTTACAAAATGCAATTGGCGGAATTTTAGGGCCTCAAGATAGCTGGATT
TTACAAAGAGGGATTAAAACGTTAGGCATCAGAATGGAAGAACATGAAAAAAACGCTCATGAAGTAGTGCGATACCTAGT
CAATCATTCGAGTATTGAAAAAGTCTATTACCCCGGTTTAGAGAACCATCAAGGACATGAGATTGCTAAAAAACAAATGA
GTGGGTTTGGTGGAATGATTTCATTTGAATTAAAAGAAGGATTTTCTGCTAAGAACTTCGTTGAAAAATTAATGATCATC
ACACTAGCCGAAAGCTTGGGAGCAGTTGAAAGTTTGATTGAAATACCTGCTTTGATGACACACGGATCTATTCCAAAAGA
AGTTCGTTTAAAATCAGGAATAAAAGATGAATTGGTTCGTTTGTCCGTTGGTTTAGAAGATGTAGAAGATCTCATTGATG
ATTTGGATCAAGCATTAGCATTTGTATCGAACAACAAAGGAGAATAA

Protein sequence :
MSKMKMKTKLIHGGISHDEATGSVNVPIHQTSTYKQEKVGKHKGYEYSRTGNPTRFAVEELIKDLEEGVRGFAFGSGSAG
THTVLSLFSKGDHIIVGDDVYGGTYRLMNKVLVHLGITFTTVDTSELSTIEPAIRPETKAIFLETPTNPLLKITDIEAVA
KIAKESNLITIVDNTFATPYHQRPLTLGADIVVHSASKYLGGHSDIVAGLVTTNNEELADKIGFLQNAIGGILGPQDSWI
LQRGIKTLGIRMEEHEKNAHEVVRYLVNHSSIEKVYYPGLENHQGHEIAKKQMSGFGGMISFELKEGFSAKNFVEKLMII
TLAESLGAVESLIEIPALMTHGSIPKEVRLKSGIKDELVRLSVGLEDVEDLIDDLDQALAFVSNNKGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-97 56
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 7e-99 56
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 2e-69 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yrhB YP_004374292.1 cystathionine beta-lyase BAC0207 Protein 1e-62 41