Gene Information

Name : ribD (CAR_c04580)
Accession : YP_004374194.1
Strain : Carnobacterium sp. 17-4
Genome accession: NC_015391
Putative virulence/resistance : Unknown
Product : fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : 1.1.1.193
Position : 475479 - 476546 bp
Length : 1068 bp
Strand : +
Note : -

DNA sequence : 
ATGGCACTGGACTTGGCAAGAAAGGGAAAAGGGTGGACAACTCCTAATCCTTTAGTTGGAGCGGTCATTGTAAAAGGTGG
AAGAGTTATTGGGCAAGGATATCATCAAAAATATGGACAGCCTCATGCGGAAGTAAATGCTATTGTATCAGCAAAAAAAG
ATGTGACTGGAGCAACGTTGTATGTCACGTTAGAACCTTGTTCTCATTTTGGGAAAACACCACCTTGTTCAGACTTATTG
ATAGACAAGAATATTAAACGAGTAGTCGTGGGCACACTTGATCCAAACCCACTAGTTGCTGGAAAAGGAATTGAAAGACT
TCGTAGCAACGGAATTGAAGTAGTTACTGGTGTATTAGAAGAAGAGAGTCAAAAATTGAATGAGATCTTTATAAAATACA
TTGTCACAAAAGAACCATTTGTGGTTATGAAAAATGCGATGTCACTAGATGGAAAAATCGCTACAGTGACAGGCGAATCT
CAATGGATTTCTGGTGAGTCATCTAGGAAACAAGTTCATTCTTTGCGCCATGAATTAGCGGGAATCATGGTCGGTATTGA
AACGATTATCAAGGATGACCCACAACTAACTTCTAGAACACTAAACAGTCGTAATCCTATTAGAATTGTTGTGGATAGTC
AGCTAAGAATCCCAATCGCCTCAAAGGTATTAACCCAACAAGATAAAGCGAAGACAATTGTGGCTACCACCAAAAGAGCC
AATAATGAAAAATTAGAAACTTTAAAGCAAATGGGGATTGAAGTGATTGTGACTAAAGAAAAATATGGAAGAGTTGATTT
ACAAGAATTAATGAAGGTAGTAGGAGCTAAAGGAATCGATAGTATCTTACTGGAAGGCGGTGCAACTTTGAATTTCTCGG
CTTTGGAAGAAGGGATCGTGGACAAAATACAGTCCTATATTGCACCAAAAATCATCGGAGGAAAAGAGGCTAAAACAGCT
GTAGAAGGGGCAGGAGTTCACTCATTAAAAAGTGCTTTTCAAATTGATCGGATGACGCCTGTGATGGTCGGAGAAGATCT
GTTTGTGGAAGGCTATATTGTTAAATAA

Protein sequence : 
MALDLARKGKGWTTPNPLVGAVIVKGGRVIGQGYHQKYGQPHAEVNAIVSAKKDVTGATLYVTLEPCSHFGKTPPCSDLL
IDKNIKRVVVGTLDPNPLVAGKGIERLRSNGIEVVTGVLEEESQKLNEIFIKYIVTKEPFVVMKNAMSLDGKIATVTGES
QWISGESSRKQVHSLRHELAGIMVGIETIIKDDPQLTSRTLNSRNPIRIVVDSQLRIPIASKVLTQQDKAKTIVATTKRA
NNEKLETLKQMGIEVIVTKEKYGRVDLQELMKVVGAKGIDSILLEGGATLNFSALEEGIVDKIQSYIAPKIIGGKEAKTA
VEGAGVHSLKSAFQIDRMTPVMVGEDLFVEGYIVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-49 41
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-49 41