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Name : ydcI (CAR_c03440) Accession : YP_004374081.1 Strain : Carnobacterium sp. 17-4 Genome accession: NC_015391 Putative virulence/resistance : Unknown Product : putative RNA helicase Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 346210 - 348387 bp Length : 2178 bp Strand : + Note : - DNA sequence : ATGATGGAAACAAACGAATCAATTGTAATAGATTTATTAAAAAATGAATTAAAAAGCTACTCTAAAAAGCAGATAACAAC AGTCTTAGATCTATTGGCTGAAGGGAATACAGTCCCATTTATAGCTCGATACCGGAAAGAAATGACCGATACGCTGGATG AAGTCCAAATACGCGAAATAGAAGAACGTCATCAATACTTAACAAATTTAGAAAAGCGTAAAAATGACGTTTTAAGAAGT ATTGGAGAACAAGAAAAATTAACACCAGAACTTGAAGGTAAAATTAAAAAAGCGACAAAAATGCAGTTAGTGGAAGATTT GTATCGTCCATTCAAACAAAAACGACGTACAAAAGCCACGATAGCTAAAGAAAGTGGCTTAGAACCTCTAGCACAATGGT TGTTGTCATTTCCAACGACCGATGTACAAGTGGAAGCTGAAAAATACGTCAATGAAGAACACAAAATTGCTACAGGTGAA GAGGCATTAGCTGGAGCACACGAAATTATTGCTGAACGAATTGGGGATGAACCAACTTACAGAACTTGGATTCGGGAATA CAGTTCTAAAAATGGGGCAATCAAAGCTAAAGTTAAAAATGCTGATAAAGATGAAAAAGGAACTTTTGAAATGTACTATG ACTACAGCGAACCGTTGACAAAAGTTGCATCTCATCGTATTTTAGCGATGAATCGCGGAGAAAAAGAAGATATCTTAAAA GTTTCTTTTGATTTGAACGAACAAAAAATTCATGAGTATTTGGAAAAACAATTAATTGAGCAGTCTAATTCCACTGCGGT TCCTTTTATAAAAGCAGCTTTTGAAGATAGTTATAAACGGTTCATCGGACCATCTATTGAACGTGAGATCCGTGCAGAAT TAACAGAAAAAGCTGGAGAACAAGCCATTCATATTTTTGGAGAAAATCTACGTAATTTATTACTACAAGCCCCACTAAAG GGTAAGATTGTTTTAGGATTAGATCCGGCTTACCGTACAGGTTGTAAACTCGCGGTTATTGATCCGACAGGGAAGGTGCT TGCGATTGATGTGATTTATCCACACAAACCAGCAGGTGCAGCTGCACGTGCTGAAGCCGCAGTTAAATTCAAAAAATTGA TTGACTCGTATCAAGTTGAAATGATCGCAATTGGAAACGGAACAGCTAGCCGTGAATCTGAAACCTTTGTTTCGGAAAAC TTAAAAGAAATGGAACGACAAGTTTTCTACGTGATTGTAAATGAAGCGGGTGCATCTGTTTACTCAGCAAGTAAGACAGC TCGTGAAGAGTTCCCTGATCTGCAAGTTGAGCAAAGAAGTGCGGTTAGCATTGCCCGCAGATTGCAAGATCCTTTAGCTG AACTTGTAAAAATTGACCCTAAATCAGTTGGTGTTGGTCAATACCAACATGATGTTTCTCAAAAACGCTTGGAAGAACGC TTGGATTTTGTTGTAGAAACGGCAGTTAACCAAGTGGGTGTAAATGTAAACACTGCAAGTACACCTTTATTGCAACACGT TGCTGGATTAAATAAAACAACAGCTACCAATGTTGTGGCTTACCGTGAAGACAATGGTCGCTTTGAAAGTCGTGCTCAAT TGAAAAAAGTTGCTCGCTTAGGCCCTAAAGCTTATGAACAAGCTGTAGGATTCTTACGCATCATTGACGGAAAAAATGTC TTAGACAATACAGGTATTCATCCAGAAACCTATAAAGAGGCAAAACAAATTTTAGAATTAGCTGGATTAACTTTATCAGA TGTTGGGAGTCTAGAAGCCAAGAAAGTTTTGGAGAAAATGGACGTAGCAGCATTGGCTGAGCAAGTTGGTTTAGGTAAAG AAACTGTAAAAGATATGCTACAGGCATTGTCAAAACCTGGCCGTGACTTAAGAGATGAAATGTCAGCTCCGTTATTGCGT ACAGATGTTTTAAGCATGGAAGATTTAATACCGGGTATGGAATTAGAAGGAACGGTTAGAAATGTGGTTGATTTTGGAGC ATTTGTAGATGTCGGAGTCAAACAAGATGGAATGGTTCATATTTCTAAATTAAGCAAAGGCTACATTCAACATCCAACAA ATGTTGTTTCTGTAGGCGATGTTGTGACGGTTTGGGTTGATAGTGTGGATCTGAAAAAAGGTCGAATCGCCTTAACAATG TTGAAACCAAAAGAATAA Protein sequence : MMETNESIVIDLLKNELKSYSKKQITTVLDLLAEGNTVPFIARYRKEMTDTLDEVQIREIEERHQYLTNLEKRKNDVLRS IGEQEKLTPELEGKIKKATKMQLVEDLYRPFKQKRRTKATIAKESGLEPLAQWLLSFPTTDVQVEAEKYVNEEHKIATGE EALAGAHEIIAERIGDEPTYRTWIREYSSKNGAIKAKVKNADKDEKGTFEMYYDYSEPLTKVASHRILAMNRGEKEDILK VSFDLNEQKIHEYLEKQLIEQSNSTAVPFIKAAFEDSYKRFIGPSIEREIRAELTEKAGEQAIHIFGENLRNLLLQAPLK GKIVLGLDPAYRTGCKLAVIDPTGKVLAIDVIYPHKPAGAAARAEAAVKFKKLIDSYQVEMIAIGNGTASRESETFVSEN LKEMERQVFYVIVNEAGASVYSASKTAREEFPDLQVEQRSAVSIARRLQDPLAELVKIDPKSVGVGQYQHDVSQKRLEER LDFVVETAVNQVGVNVNTASTPLLQHVAGLNKTTATNVVAYREDNGRFESRAQLKKVARLGPKAYEQAVGFLRIIDGKNV LDNTGIHPETYKEAKQILELAGLTLSDVGSLEAKKVLEKMDVAALAEQVGLGKETVKDMLQALSKPGRDLRDEMSAPLLR TDVLSMEDLIPGMELEGTVRNVVDFGAFVDVGVKQDGMVHISKLSKGYIQHPTNVVSVGDVVTVWVDSVDLKKGRIALTM LKPKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 3e-121 | 45 |
