|
Name : gshR (CAR_c03410) Accession : YP_004374078.1 Strain : Carnobacterium sp. 17-4 Genome accession: NC_015391 Putative virulence/resistance : Unknown Product : putative glycine betaine/carnitine/choline ABC transporter ATP-binding protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1125 EC number : - Position : 342646 - 343626 bp Length : 981 bp Strand : + Note : - DNA sequence : ATGATACTTTTTGAAAATGTTTCTAAAGAATATGAAAAAGGAAAACCCGTAGTATCAAATATAAATTTAGAAATAAAAGC TGGGGAATTTTTCGTGCTTATTGGACCCAGTGGTAGCGGGAAAACAACAACTTTAAAAATGATTAATCGATTGATTTCGT TAACGTCTGGTTTTATTCGGATAGAGGGCAAACCAATCAGCGACTATAATTTGCAAGAGCTACGATGGAATATCGGGTAT GTCCTGCAGCAAATCGCTCTGTTTCCGAATATGACGGTTGAAGAAAACATTACACTTGTACCTGAAATGAAGAAATGGTC TAAAGAAGATATGCAAGAAAGAGTGACTGAACTTCTTTCGAGTGTTGATCTAGATCCAGATGTTTATCGAAAGCGTAAAA CTTCTGAGCTTTCAGGCGGAGAGCAACAAAGAATTGGCGTTATCCGAGCGTTAGCAGCTAACCCTGATATCATTCTAATG GATGAACCCTTTAGTGCTTTAGATCCTATCAGTAAACGTAATTTACAAAAAGATGTGGCTAAGCTGCAAAAAAAATTGAA TAAGACGATTGTTTTTGTAACACATGATATGCAAGAAGCATTGGCTTTAGGAGATCGCATCTGTTTAATGAATAACGGGA AAATAGAACAAATAGGAACGCCAGATGAGATTCGGAAACACCCCAAAAATGATTTTGTTCGGAACTTTTTACAGATGGGA ATTAGTGAGTTGAAAGAGCCGCCAACAATTCAACATCTCATAGAAGCAGGACAAATAGAACTTGATGAAATTATTGAAGA GGCGAAGATCTATTTATCTCCTGAGGATACGATTGATGCATTGGTGGTCGCTTTAGCTAAAGAAGATTTTGTGATCATCA AAGAAACTAACGGCCAGAAGATAGGCAAGATTACAAAGCAACAACTGCTCAATTATTTGGCACAAGAAATCGATGTTGAA CAAGAAAGAGTGGTGAACTAG Protein sequence : MILFENVSKEYEKGKPVVSNINLEIKAGEFFVLIGPSGSGKTTTLKMINRLISLTSGFIRIEGKPISDYNLQELRWNIGY VLQQIALFPNMTVEENITLVPEMKKWSKEDMQERVTELLSSVDLDPDVYRKRKTSELSGGEQQRIGVIRALAANPDIILM DEPFSALDPISKRNLQKDVAKLQKKLNKTIVFVTHDMQEALALGDRICLMNNGKIEQIGTPDEIRKHPKNDFVRNFLQMG ISELKEPPTIQHLIEAGQIELDEIIEEAKIYLSPEDTIDALVVALAKEDFVIIKETNGQKIGKITKQQLLNYLAQEIDVE QERVVN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 2e-52 | 50 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 9e-53 | 50 |
