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Name : serS2 (CAR_c24890) Accession : YP_004376157.1 Strain : Carnobacterium sp. 17-4 Genome accession: NC_015391 Putative virulence/resistance : Unknown Product : serine--tRNA ligase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2599462 - 2600745 bp Length : 1284 bp Strand : - Note : - DNA sequence : ATGTTAGATATTAAACAATTAAGACTAGATTTTGATGCAACGGCTAAAAAGTTAGAAGCACGTGGAGTTAAACATGAGCT ATTAGAGGAATTCATTACTTTAGACAGTGAAAGACGTTCTTTAATTGTCACAACAGAAGAATTAAAAAGTTACCGTAATG AAGTATCTGGTGCAATTGCAATGCTAAAACGCAGTAAAGAGAATGCAGATGAAAAAATAAAGGAAATGCGTGATGTTGGA GAAAAAATAAAAGATTTAGATGAACAATTAGCAGCAATTGATGAGAAAATAGAAACAATTGCTACTGGATTGCCAAATTT ACCGCATGATTCTGTGCCAGTAGGGGCAGATGAAGCAGACAACGTTGAAGTCCGCAAATGGGGAACGCCTGTAGAAGTAG CGTTTGAAGCAAAAGCGCATTGGGAAGTTGCTGAAGAGTTAGATATTTTAGACTTTGAACGAGGAGCAAAAGTTTCTGGA AGTCGTTTTGTCTACTATAAAGGACTAGGTGCTAGATTAGAACGAGCAGTATACAATTTTATGCTAGACTTGCACACCGG TGAACATGGTTATACAGAAATGATGACACCTTATTTAGTTAATAGCGATTCAATGTTTGGTACAGGCCAATTTCCAAAAT TTAAAGAAGACGTTTTCCAAATTGAAGGAACAGATCTAACACTGATACCAACAGCAGAAGTTCCTTTGACAAACTATTAC CGCAATGAAATTTTAAAAGAAGAGCAACTCCCAGTATACTTTACTGCATTAAGTCCTTCATTTAGATCAGAAGCAGGTAG TGCAGGAAGAGACACTCGCGGATTGATACGCCTGCACCAATTTAATAAAGTTGAAATGGTGAAATTTAGCAAACCAGAAA CTTCTTATGATGAATTAGAAAAGATGACGAACAATGCTGAAGCAGTATTGCAAAAGTTAAATCTTCCTTATCGTGTACTA GCATTATGTACTGGAGATATGGGATTCTCTGCTGCAAAAACCTACGACCTAGAAGTGTGGATTCCTGCACAAGAAACGTA CCGTGAGATCAGCTCTTGCTCAAATACAGAAGCATTTCAAGCTAGACGAGCAAAAATACGTTACCGTAATGAAGAAACAG GTAAATTAGAATATGTCCACACATTAAATGGTTCAGGATTAGCAGTCGGACGAACAATAGCGGCTATTTTAGAAAACTAC CAACAAGCAGATGGCTCAGTTAAGATTCCAGATGTATTGGTTCCGTATATGGGTGGCGTAACTGAAATTCGTAAAGCAGA TTAA Protein sequence : MLDIKQLRLDFDATAKKLEARGVKHELLEEFITLDSERRSLIVTTEELKSYRNEVSGAIAMLKRSKENADEKIKEMRDVG EKIKDLDEQLAAIDEKIETIATGLPNLPHDSVPVGADEADNVEVRKWGTPVEVAFEAKAHWEVAEELDILDFERGAKVSG SRFVYYKGLGARLERAVYNFMLDLHTGEHGYTEMMTPYLVNSDSMFGTGQFPKFKEDVFQIEGTDLTLIPTAEVPLTNYY RNEILKEEQLPVYFTALSPSFRSEAGSAGRDTRGLIRLHQFNKVEMVKFSKPETSYDELEKMTNNAEAVLQKLNLPYRVL ALCTGDMGFSAAKTYDLEVWIPAQETYREISSCSNTEAFQARRAKIRYRNEETGKLEYVHTLNGSGLAVGRTIAAILENY QQADGSVKIPDVLVPYMGGVTEIRKAD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-150 | 70 |
