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Name : gabD (CAR_c24520) Accession : YP_004376123.1 Strain : Carnobacterium sp. 17-4 Genome accession: NC_015391 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 2556653 - 2558125 bp Length : 1473 bp Strand : - Note : - DNA sequence : GTGATTTTAGTGGCAAACACGCAAGCAAAATTACCAGAAATTCAAACGGGACTTTACATCAATGGCCAATGGGTCGAAGG ATCGCTAGAAAAAAAAGCGGTCAATAATCCAGCAACTAAAGAAGAACTGATACAAGTGTCTCAAGGCGGAGAAACAGAAA CACTACAGGCGATTCAGGCAGCTAAAGAAGCTTTTCCAAAATGGTCAGGCATGGAGCTAGCTGATCGTGTGAAACTTATC CATGCAATTGCAGATAAAATTGAAGAAAAAGCAGATCAATTAGCCTTAATTATGACACTAGAACAAGGGAAACCATTAAA AGAAGCTAAAGGAGAAATCCTGACAAATATTCAAAATTTGCATTGGAATGCAGAAGAAGCGCGACGTATTTATGGAGAAA CGATTCCTGCTCCTAATCAACACAAGTATGAAGTGAAAAAACAACCTGTTGGCGTCGTAGGAGCAATTACTCCGTGGAAC TTTCCGTCAAATATGATTGTACGTAAAATCGCTCCAGCTATTGCAGCAGGCTGTACCGTCATTTTAAAACCAGCAAGTAG TACCCCGTTATCTGCTATTGCGATATTTGAAATTTTCCATGAAGTTGGCTTACCAGCAGGAGTAGCAAATCTCGTTATCG GACCATCAAAGGAAATCGGAAAAACGCTAACCGATAGTGATGATGTGCGAAAATTAACCTTTACAGGCTCAACTGAAGTA GGAAAAATGCTCTATGAACAATCTGCCCAAACAATGAAGAAAATTTCGTTTGAATTAGGAGGTCATGCTCCGTTTATTAT TTTTGACGATGCAGATATTGATCAAGCTGTAGACGGGCTTGTTGCTATGAAGTTTAGAAACAATGGGCAAGCTTGTACAT CTCCAAATCGTATTTTTGTGAGTAAAGCCGTTAAAAAAGAATTTGTTGAAAAGTTAGAAGTCGCAGTTGGAAAAGTAACG GTCGGTAATGGTTTAACTGATGTCATGGTAGGACCACTTATTAATGAAGAAGCGATTGAAACGATCCAAGCTCAAGTCGA CGATGCAAAAACTAAAGGAGCTACTGTGCTTGCAGGTGGCGAAAGACTCACTGAGGGAGACTACGCTAATGGTTACTTTT ACGCGCCGACTATCTTAGATGGAGTGACCACCGAGATGGATATCTTCTATGAAGAAACGTTTGGTCCGGTTATTCCGTTA ATTGATTTTGAAGATGAGGAAGAAGTTATCAAAATGGCAAATGACAGCATCTTTGGATTAGCGTCTTACTTCTTTACAGC TGATTTAAAACGAGCTGAAAAAGTCAGTGAAGCTTTAGAATATGGTTTAGTTGGCGTCAATAATACAGCTATCTCGACTT CTGAGGCGCCATTTGGCGGTGTAAAACACTCAGGAGTTGGCCGTGAAAATGGAAGTTATGGAATACAAGAATTTTTAGAA GTGAAATTTGTTCACACAAAATATTTAGATTGA Protein sequence : MILVANTQAKLPEIQTGLYINGQWVEGSLEKKAVNNPATKEELIQVSQGGETETLQAIQAAKEAFPKWSGMELADRVKLI HAIADKIEEKADQLALIMTLEQGKPLKEAKGEILTNIQNLHWNAEEARRIYGETIPAPNQHKYEVKKQPVGVVGAITPWN FPSNMIVRKIAPAIAAGCTVILKPASSTPLSAIAIFEIFHEVGLPAGVANLVIGPSKEIGKTLTDSDDVRKLTFTGSTEV GKMLYEQSAQTMKKISFELGGHAPFIIFDDADIDQAVDGLVAMKFRNNGQACTSPNRIFVSKAVKKEFVEKLEVAVGKVT VGNGLTDVMVGPLINEEAIETIQAQVDDAKTKGATVLAGGERLTEGDYANGYFYAPTILDGVTTEMDIFYEETFGPVIPL IDFEDEEEVIKMANDSIFGLASYFFTADLKRAEKVSEALEYGLVGVNNTAISTSEAPFGGVKHSGVGRENGSYGIQEFLE VKFVHTKYLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 3e-95 | 50 |
