Gene Information

Name : cbh (CAR_c22540)
Accession : YP_004375927.1
Strain : Carnobacterium sp. 17-4
Genome accession: NC_015391
Putative virulence/resistance : Virulence
Product : choloylglycine hydrolase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG3049
EC number : 3.5.1.24
Position : 2363524 - 2364441 bp
Length : 918 bp
Strand : +
Note : -

DNA sequence : 
TTGGAGTATGCTTTAGATAACAAAGTTGTTGTTACACCAAGAAACTACAAGTTTAAGCTACGCAAAGAGGAAGAGCTCAC
TTCACACTATTCGTTAATTGGTATGGCTATGGTAGTGGATAATTACCCTTTATATTTTGATGCAGTTAATGAAAAAGGTC
TTGGAATGGGCGGATTAAACTTTGACGGTTTTGCAGTCTATCACGACGAGCAAAAAGACAAAAAGAATATTACACCTTTT
GAATTTATCCCTTACTTATTAGGCAAATGCGCTACTGTCCAAGAAGCTAAAACGCTATTAAAAGACATTAATCTGATCAA
CATTTCTTTTAGTGATAAGTTACAATTATCGCCATTACATTGGTTGATCTCAGATAAAGACAGTTCAATTGTTGTCGAAT
CAACTTCTGAAGGATTACAAGTATACGACAATCAATTTGGTGTATTAGCTAACAATCCTTCTTTCCCATATCATAAATAC
AATATGAGCAATTACTTAAACCTTACGTCAAATATCCCAGAAAACCGCTTAAGTTCTAAGGTTGATTTAGATGTCTACAG
TCGAGGAATGGGAGCCATTGGTCTTCCAGGAGATCTTTCTTCTTCATCAAGATTTGTTCGTGCAGCATATGCTCGTTTAA
ATTCTGTTGCAGATAAAACAGAAAATGCGAATGTTTCTCAATTTTTCCACATTTTAGATTTTGTAGCACAACCAAGAGGT
GGTGCTATGGCGCCAGAAGGAATTTATGAAATCACTCAATATTCTTCTTGTGTAAGCACTGAAACGCAAACTTATTACTA
TAAAACGTATGAGAACAGCCAAATATGTGCCGTGTCTATGAAAGATTTACCTTTAGACAACGACGACCTATTTGTTTACG
AATTAGAAAAAGATCAAGCTATTAACTACACTAACTAG

Protein sequence : 
MEYALDNKVVVTPRNYKFKLRKEEELTSHYSLIGMAMVVDNYPLYFDAVNEKGLGMGGLNFDGFAVYHDEQKDKKNITPF
EFIPYLLGKCATVQEAKTLLKDINLINISFSDKLQLSPLHWLISDKDSSIVVESTSEGLQVYDNQFGVLANNPSFPYHKY
NMSNYLNLTSNIPENRLSSKVDLDVYSRGMGAIGLPGDLSSSSRFVRAAYARLNSVADKTENANVSQFFHILDFVAQPRG
GAMAPEGIYEITQYSSCVSTETQTYYYKTYENSQICAVSMKDLPLDNDDLFVYELEKDQAINYTN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0521 NP_814299.1 choloylglycine hydrolase Not tested Not named Protein 7e-75 55
ef0040 AAM75246.1 EF0040 Not tested Not named Protein 6e-75 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cbh YP_004375927.1 choloylglycine hydrolase VFG2162 Protein 1e-76 56