Gene Information

Name : xylA2 (CAR_c21450)
Accession : YP_004375818.1
Strain : Carnobacterium sp. 17-4
Genome accession: NC_015391
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2115
EC number : 5.3.1.5
Position : 2252824 - 2254134 bp
Length : 1311 bp
Strand : -
Note : -

DNA sequence :
ATGACATACTTTCCATCAATCGATAAAATTAAATATGAGGGACCAGAATCAACAAATCCTTTCGCATTCCGTCATTACAA
TCCGGAAGAAATAGTACTAGGAAAAACTATGAAAGAACAATTGCGTTTCTCAGTAGCTTATTGGCATACATTTACAAATG
ATGGGTCGGATCCATTTGGTAAAGGCGTCAATCAAAGAGACTGGTTAACGGATGATCCAATGGAAACGGCAAAAAACAGA
GTAGAAGCATCGTTTGAATTTTTTGAAAAATTAGGAGTTGAGTATTTCTGTTTCCATGATATGGATGTGGCTCCTTACGG
AGAAACGCTAGAAGAATTTTTCACAAATTTAGATATAATCACAGATCTTATTCAAGAAAAAATGGACCAAACAGGAATTA
AATTATTATGGAATACAGCTGACAGACATTCTAACCCTATATATGTTCATGGAGCTGCTTCAAGTTCTAATGCAGATGTT
TATGCTGTATCAGCTGCACAAGTGAAAAAAGGGATTGATATCAGTAAAAAGTTAGGCGGAAAAAATTTCGTTTTCTGGGG
CGGACGTGAAGGTTACGAAAATCTAATCAATACAAATATGAAATTAGAAGAAGAAAATATTGCTCGTCTTTACCATATGG
CGATTGATTATTCGAACAAAATTGGTCATGAAGAGCTGATGTTCTTACTAGAACCTAAACCAAAAGAACCAATGAAACAC
CAATACGATTTTGATGCAGCAACAAGTATGGCATTCTTACAAAAATACGATTTAACTGATCGTTTCAAATTGAATTTAGA
AGCAAACCATGCAACCTTGGCTGGTCATACATTTGAACACGAAATGAATGTAGCTCGTAACTACAACGCTTTAGGATCAC
TTGATGCGAACCAAGGAGATATGCTTTTAGGATGGGATACAGATGAATTCCCAACAGATGTTTATTCAGTAACCTTAGCT
ATGGTTGAATTTTTAGAAAACGGCGGAATTGAACCTGGAGGAATCAACTTTGACGCAAAAGTACGCCGAACATCATTTGA
AATGGAAGATTTGTTCTTAGCACATATTGCAGGAATGGATACCTTTGCTAGAGGATTAAAAGCAGCTGCTAAAATAAAAG
AAACGCGCTTCTTAGATGAATTAAAAGAAAAACGTTATGCAAGTTATGAAACAGGTATTGGTTCAGATATTCTATCTGGG
AAAGCAGATTTAGAAACATTGACAACGTATGCTTTAGAACATAACGAAATCAAAAATGAATCATCTCATATTGAATACAT
CAAATCAAAATTAAATGATTACTTAATTTAA

Protein sequence :
MTYFPSIDKIKYEGPESTNPFAFRHYNPEEIVLGKTMKEQLRFSVAYWHTFTNDGSDPFGKGVNQRDWLTDDPMETAKNR
VEASFEFFEKLGVEYFCFHDMDVAPYGETLEEFFTNLDIITDLIQEKMDQTGIKLLWNTADRHSNPIYVHGAASSSNADV
YAVSAAQVKKGIDISKKLGGKNFVFWGGREGYENLINTNMKLEEENIARLYHMAIDYSNKIGHEELMFLLEPKPKEPMKH
QYDFDAATSMAFLQKYDLTDRFKLNLEANHATLAGHTFEHEMNVARNYNALGSLDANQGDMLLGWDTDEFPTDVYSVTLA
MVEFLENGGIEPGGINFDAKVRRTSFEMEDLFLAHIAGMDTFARGLKAAAKIKETRFLDELKEKRYASYETGIGSDILSG
KADLETLTTYALEHNEIKNESSHIEYIKSKLNDYLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 5e-159 74
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 4e-159 74