|
Name : atkB (CAR_c20630) Accession : YP_004375736.1 Strain : Carnobacterium sp. 17-4 Genome accession: NC_015391 Putative virulence/resistance : Resistance Product : copper-transporting P-type ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : - Position : 2151059 - 2153131 bp Length : 2073 bp Strand : - Note : - DNA sequence : ATGAGAAAAGATCAAGATCAAGCTAATCATCCGAATCATAGCGAAGTGGATCATGAGGGAATGGACCACAGCAAAATGGA CCACAGCGAAATGGATCATACCAGTATGAACCACGCTGGTGGACATGCAGGGCATCACGCAATGATGATAAAAGATTTCA AAAAAAGATTTTGGGTTTCGTTGATTTTAGCAGTTCCCATTTCTATCTTGTCTCCAATGTTCCAAATGCTTTTTGGATAT GAGATTAGCTTTTTAGGAGATGACCTCCTTTTGTTTATTCTCTCAACAATTCTTTTTTTCTACGGAGGAAAGCCTTTCTT AGTTGGAGCATGGAGCGAATTGAAATCACGCACCCCAGCCATGATGATGCTGATCTCACTAGCTATTATTACTTCGTATG TTTATAGTACTTTAACTACATTTTTTATCTCTGGCAGTGATTTTTTCTTTGAATTGGCTACGTTAATTGTCATTATGCTT CTTGGGCATTGGATCGAAATGAGATCAGTCATGGGGGCTTCAAAAGCCTTAGAAGCATTGATCAAATTAATGCCAAAAGA AGCACACAAAATTGATAAGTCGGGTAATATTATTGAAGTTACGGTAGAAGATTTAAAACCTGGTGATAAAATTCTTGTTA AGTCAGGTGAAAAAATCCCTCTAGATGGTAGTATTTATGAAGGGACATCTGATATAGACGAATCTATGTTGACTGGAGAA TCTGTGCCAGTAGAAAAAGTTCCTGGCATGAATGTTATTGGTGCATCAGTTAATGGTGAAGGGGTATTGAAAATTGAAGT CAATAAGATTGGGAAGGATACGTATCTTTCTCAAGTTGTGCAATTAGTCCAAGACGCTGAAAAAACAAAATCCAAAGCTC AAGGATTTGCTGATATTGCTGCCAAATGGCTCTTCTATGTAGCTGTTGTTATTGGTTTACTAACGCTTATCTACTGGTCA GTCACTGGCGACTTTGATTTTGCTTTAGAACGGATGGTAACCGTGTTGATTATTGCTTGTCCACATGCATTAGGGCTGGC AGGCCCATTAGTCACTTCAAGATCGTCTTCGATTGCAGCTAGTAAAGGGTTATTGATTCGTAACCGTATTGCTTTCGAAG GAGCACATAAAATTGATAAAATCGTTTTTGATAAAACAGGTACGTTAACAGAAGGTAATTTTGGTGTAACAGATATTCAA CCTGTAGATGCAGTGAGCGAAACTGAGTTGCTAACTTTAGCGTATTCAGTTGAAACACAATCAGATCACCCGATTGCTAA GGGAATCGTTAAAGAAGGAAAAGAACGCAAACTAGAAATTTATGATGTTAAAGACTATCGTAACCTCACAGGTAAAGGAT TAACGGCTACTGTTAAAGATGCAGAAGTTTCAGTTGTTAGTCCGGGAACGATGAAAAACAATCATATATCATTTGATGAA AAAAACTATGAAGCATTGGCTCAACAAGGGAAAACGGTTGTATTTATTTTACGAAACAATAAACTGCAAGGAATAATTGC TTTAGCCGATATCATAAGAGAATCCTCTTATAAAGTTATCAAAGAGTTGAATGATCTAGGCATTGAAACTATTATGATGA CAGGAGACAACAAACGAGTAGCTAATTATGTAGGTGATAAACTAGGACTCTCGCAAGTAATTGCTGAAGTTCTTCCTCAT GAAAAGTCTAAGTATGTGTCCAAATTGAAAAAAGATGGTAAAAAAGTTGCTATGATTGGAGATGGTATTAACGACGCTCC AGCGTTAGCAGAATCGGATGTTGGAATTGCAATTGGAGCAGGGACAGATGTCGCTATTGAAACAGCCGATATTATTTTAG TGAATAGCAACCCAGTAGATGTGTTGACTATTATTAAATTATCTAAGGCTAGTTACAAAAAAACAATTGAAAACTTTGTA TGGGCAGCGGGATATAATGTGATAGCCATTCCGTTGGCAGCAGGTATTTTAATCAATCAAAACATATTGATTACGCCAGC TATTGGAGCGGTAGTTATGTCTCTAAGTACCATTATTGTTGCAATAAATGCTCAGATGTTGAAAATCAATTAA Protein sequence : MRKDQDQANHPNHSEVDHEGMDHSKMDHSEMDHTSMNHAGGHAGHHAMMIKDFKKRFWVSLILAVPISILSPMFQMLFGY EISFLGDDLLLFILSTILFFYGGKPFLVGAWSELKSRTPAMMMLISLAIITSYVYSTLTTFFISGSDFFFELATLIVIML LGHWIEMRSVMGASKALEALIKLMPKEAHKIDKSGNIIEVTVEDLKPGDKILVKSGEKIPLDGSIYEGTSDIDESMLTGE SVPVEKVPGMNVIGASVNGEGVLKIEVNKIGKDTYLSQVVQLVQDAEKTKSKAQGFADIAAKWLFYVAVVIGLLTLIYWS VTGDFDFALERMVTVLIIACPHALGLAGPLVTSRSSSIAASKGLLIRNRIAFEGAHKIDKIVFDKTGTLTEGNFGVTDIQ PVDAVSETELLTLAYSVETQSDHPIAKGIVKEGKERKLEIYDVKDYRNLTGKGLTATVKDAEVSVVSPGTMKNNHISFDE KNYEALAQQGKTVVFILRNNKLQGIIALADIIRESSYKVIKELNDLGIETIMMTGDNKRVANYVGDKLGLSQVIAEVLPH EKSKYVSKLKKDGKKVAMIGDGINDAPALAESDVGIAIGAGTDVAIETADIILVNSNPVDVLTIIKLSKASYKKTIENFV WAAGYNVIAIPLAAGILINQNILITPAIGAVVMSLSTIIVAINAQMLKIN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0105 | YP_252020.1 | hypothetical protein | Not tested | SCCmec | Protein | 7e-98 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| atkB | YP_004375736.1 | copper-transporting P-type ATPase | BAC0629 | Protein | 2e-154 | 56 |
| atkB | YP_004375736.1 | copper-transporting P-type ATPase | BAC0079 | Protein | 2e-143 | 46 |
| atkB | YP_004375736.1 | copper-transporting P-type ATPase | BAC0383 | Protein | 3e-122 | 43 |
