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Name : lysS (CAR_c02010) Accession : YP_004373968.1 Strain : Carnobacterium sp. 17-4 Genome accession: NC_015391 Putative virulence/resistance : Virulence Product : lysine--tRNA ligase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 204483 - 205982 bp Length : 1500 bp Strand : + Note : - DNA sequence : ATGAGCCACGAAGAATTAAACCATGAAGAATTAAATGATCAATTGATTGTTCGCCGTGAAAAGCTTGATACCTTACGTGA GCGTAATGTGGATCCTTTTGGCGGACGTTTCGAAAGAACGCATCTATCTAATGAACTACATGAAGCGTATGATGAATTTA CTAAAGAAGAAATAGCTGGAAAAGAAGAAACAGCAACTGTTGCAGGCCGTATTATGACTAAACGCGGTAAAGGTAAAGTT GGGTTTGCTCACTTACAAGATCGTAAAGGACAAATTCAAATCTATGTTCGTAAAGATACTGTTGGTGAAGAAGACTATGA GACTTTTAAGAATGCAGATTTAGGGGACTTTATTGGTGTTACTGGAACAATTATGAAAACTGATACGGGTGAAGTGACTA TCAAGCCAACTTCTATCACTCAATTATCAAAAGCGTTACGTCCTTTGCCAGATAAATATCATGGATTGACAAATGTCGAG CAACGTTATCGTCAACGTTACTTGGACTTGATCAGCAATCGTGAAAGTTTTGACCGTTTTACAAAACGCAGCCAAATCAT TCGCGAAGTTCGTAACTATTTGAATGAACAAGATTACTTAGAAGTAGAAACTCCAACGCTTCACAATTTAGCCGGTGGAG CTGCTGCACGTCCATTCATTACACACCACAATGCTTTAGATATGGAACTTTACTTGCGTATAGCTCTTGAATTGCATTTG AAACGATTAATCGTTGGTGGAATGGAAAAGGTTTATGAAATTGGTCGAGTATTCCGTAATGAAGGAGTAGATACAACTCA TAACCCAGAATTTACTATGTTGGAAGCTTATACTGCTTATACTGATTTTGAAGATGTAATGGACTTAGTTGAGGGATTGA TCCGTACCGTAGCACAACGTGTATTAGGTACAGGGCAAATCACGTACAATGGACAAGCGATTGATTTAGAGTCTTCTTGG AAGAGACAACATATGGTTGATGCCATAAAAGAACATTCAGGGGTAGATTTTTGGCAACACATGACAAATGAAGAAGCCCG TGCATTAGCTAAAGAACATGATGTTCCTGTAACTGAACATAGCCAATTTGGCCATGTAGTAAATGAATTTTTCGAAAAAT TTGTAGAAGATAAACTGATTCAACCAACATTTATCTACGGACATCCTTTAGAAATTTCACCATTAGCTAAGAAAAACACA GAAGATCCTCGCTTTACAGATCGTTTTGAAGCATTTATTGTAGGACATGAATATGGAAATGCCTTTAGTGAATTAAATGA TCCGATAGATCAAAGAGAACGTTTTGAATCACAAATGAAAGAACGTGCACTAGGAAATGACGAAGCTCATATGATCGATG AAGATTTTATTGAATCTTTAGAGTATGGTATGCCTCCAACGGGTGGATTAGGAATTGGTATCGACCGTTTAGTGATGCTA TTAACTGATGCTCAATCTATTCGAGATGTACTGCTGTTTCCAACAATGCGTAATCAATAA Protein sequence : MSHEELNHEELNDQLIVRREKLDTLRERNVDPFGGRFERTHLSNELHEAYDEFTKEEIAGKEETATVAGRIMTKRGKGKV GFAHLQDRKGQIQIYVRKDTVGEEDYETFKNADLGDFIGVTGTIMKTDTGEVTIKPTSITQLSKALRPLPDKYHGLTNVE QRYRQRYLDLISNRESFDRFTKRSQIIREVRNYLNEQDYLEVETPTLHNLAGGAAARPFITHHNALDMELYLRIALELHL KRLIVGGMEKVYEIGRVFRNEGVDTTHNPEFTMLEAYTAYTDFEDVMDLVEGLIRTVAQRVLGTGQITYNGQAIDLESSW KRQHMVDAIKEHSGVDFWQHMTNEEARALAKEHDVPVTEHSQFGHVVNEFFEKFVEDKLIQPTFIYGHPLEISPLAKKNT EDPRFTDRFEAFIVGHEYGNAFSELNDPIDQRERFESQMKERALGNDEAHMIDEDFIESLEYGMPPTGGLGIGIDRLVML LTDAQSIRDVLLFPTMRNQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 2e-119 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_004373968.1 | lysine--tRNA ligase | VFG1668 | Protein | 1e-119 | 48 |
