Gene Information

Name : fliQ (CAR_c19820)
Accession : YP_004375655.1
Strain : Carnobacterium sp. 17-4
Genome accession: NC_015391
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliQ
Function : -
COG functional category : N : Cell motility
COG ID : COG1987
EC number : -
Position : 2077169 - 2077432 bp
Length : 264 bp
Strand : -
Note : -

DNA sequence :
ATGACAACAGTAAAAGTTTTAGACATTATAAGAGAAGCCTTTATGGTTATGATAACTGTAGCTGGACCGACATTGATCAT
TGCGTTAGTCATAGGGTTGATTATTAGTATCATACAAGCAACAACACAACTTCAGGAACAAACATTAAGTTTTGTACCTA
AAATCTTAGCTGTGATCGTCTCGTTGATCATTTTTGGAAATTTCATGCTGAATAGTCTAATTGGATTTACGCAGAAAATT
TTTGAAATGATTGCGGCACTTTGA

Protein sequence :
MTTVKVLDIIREAFMVMITVAGPTLIIALVIGLIISIIQATTQLQEQTLSFVPKILAVIVSLIIFGNFMLNSLIGFTQKI
FEMIAAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
escS YP_003236102.1 T3SS structure protein EscS Virulence LEE Protein 9e-05 46
escS NP_290282.1 hypothetical protein Virulence LEE Protein 9e-05 46
ECs4582 NP_312609.1 EscS Virulence LEE Protein 9e-05 46
escS AAC38370.1 EscS Virulence LEE Protein 6e-05 46
escS AAC31527.1 L0048 Virulence LEE Protein 6e-05 46
escS ACU09472.1 hypothetical protein Not tested LEE Protein 6e-05 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliQ YP_004375655.1 flagellar biosynthesis protein FliQ VFG0716 Protein 2e-05 46
fliQ YP_004375655.1 flagellar biosynthesis protein FliQ VFG0826 Protein 2e-05 46