Gene Information

Name : arcB (CAR_c19660)
Accession : YP_004375639.1
Strain : Carnobacterium sp. 17-4
Genome accession: NC_015391
Putative virulence/resistance : Unknown
Product : ornithine transcarbamoylase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : 2.1.3.3
Position : 2060753 - 2061769 bp
Length : 1017 bp
Strand : -
Note : catabolic OTCase

DNA sequence :
ATGACAAAACAAGTATTTCAAGGACGCAGTTTGTTAGCTGAAAAAGATTTTACAAAAGACGAATTAATGTATTTGATTGA
CTTATCCGCACATTTAAAAGAGCTAAAAAAGAAAGGGATTCCACATCATTATTTAGAAGGGAAAAACATTGCCTTATTGT
TTGAAAAAGCTTCTACACGTACACGAGCTGCTTTTACAACGGCTGCGATTGACTTAGGCGCACATCCAGAGTACCTTGGG
AAAAATGATATCCAGTTAGGTAAGAAAGAATCTGTTGAAGATACAGCTCGAGTACTCGGAAGTATGTTTGATGGAATTGA
ATTTCGTGGATTCAAACAAAATACCGTAGAACAATTAGCAGAATTTTCGGGTGTTCCGGTATGGAATGGGTTGACGGATG
AATGGCATCCAACGCAAATGATTGCCGATTTTTTGACGGTTAAAGAAAACTTTGGGCATCTTGAAGGACTTACGCTAGCT
TATGTTGGGGATGGCCGTAACAATGTAGCAAACAGCCTGCTAGTAACAGGTGCAATTTTAGGTGTGAACATTCGAATCGT
CTCACCTGAATCTTTATTCCCAGAAAAAGAATTAGTCGATATGGCTCAAACGTTTGCTGATCAATCTGGTAGTAAACTGA
TGATTACAAAAGATGTTGCAGAAGGCGTTAGAGGGGCAGATGTTTTATACACCGATGTTTGGGTATCTATGGGAGAAGAA
GATAAGTTTGCAGAACGGATCGAGTTATTGACTCCTTATCAGTTAAATATGGATATGGTTCGTGCAACTGGCAAAGATGA
CATGATTATTCTACACTGCTTACCAGCCTTCCACGATACCAATACCGACTATGGAAGAGACGTAAAAGCAAAACACCATA
TTGATGCGATGGAAATTACAGATGAAGCATTCAGAAGCAAACATGCACGTCAATTTGAGCAAGCTGAAAACCGGATGCAC
TCTATCAAAGCTATTATGGCTGCAACACTAGGAAATTTATTCATTCCTAAAGTATAG

Protein sequence :
MTKQVFQGRSLLAEKDFTKDELMYLIDLSAHLKELKKKGIPHHYLEGKNIALLFEKASTRTRAAFTTAAIDLGAHPEYLG
KNDIQLGKKESVEDTARVLGSMFDGIEFRGFKQNTVEQLAEFSGVPVWNGLTDEWHPTQMIADFLTVKENFGHLEGLTLA
YVGDGRNNVANSLLVTGAILGVNIRIVSPESLFPEKELVDMAQTFADQSGSKLMITKDVAEGVRGADVLYTDVWVSMGEE
DKFAERIELLTPYQLNMDMVRATGKDDMIILHCLPAFHDTNTDYGRDVKAKHHIDAMEITDEAFRSKHARQFEQAENRMH
SIKAIMAATLGNLFIPKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-76 54
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 1e-76 54
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-76 54
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-76 54
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-76 54
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 2e-76 54
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 1e-76 53