Gene Information

Name : CAR_c19260 (CAR_c19260)
Accession : YP_004375599.1
Strain : Carnobacterium sp. 17-4
Genome accession: NC_015391
Putative virulence/resistance : Resistance
Product : putative ABC exporter, ATP-binding subunit
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2013925 - 2014605 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence :

ATGAAATTAATAGAGTTGGATAATGTGAGCCGTTCATTTGGTGAAGGGCATAAACGAGTAGAAGCATTGAAGGATACAAC
TTTTTCTGTAGGAGAAGGAGAGTTTGTTGCGATTATTGGTCCAAGTGGTTCTGGTAAAAGTACACTCTTAACGATTATTG
GAGGATTGCAAAAGCCTTCAAAAGGTACCGTTATGATTAATGAAAAGCCTTTTAGTGAAGTTGCTGAAAAAAAACGAGCT
GCTTTACGCTTTGAAGAAATTGGATTTATTTTGCAAGCGTCAAATTTAGTTCCATTCTTAACGGTAAAAGACCAATTGAA
TCTGGTTAACAAAGTTGAAAAAACAAAAGTTGATAAGCAGAAACGAGACGATTTACTAGATGAGTTAGGTATCTTGGATT
TGAAAGATAAGTACCCAAGTGATCTATCAGGTGGAGAACGCCAACGAGTTGCAATCGCTCGCGCACTGTATCATGAGCCG
TCTGTTATTTTGGCAGATGAACCGACAGCAAGCTTGGATTCTGAAAAGGCCTTTGAGGTAGTAGAAATACTAGCACGCGA
AACAAAAAACAAAAAGAAAGCAACTATTATGGTTACCCATGATGAACGATTGATCAGCCAATGTGATAAAGTGTATGTTA
TGAAAGATGGTATTTTGTCTTTAAGAGAATCAAACGAATAA

Protein sequence :

MKLIELDNVSRSFGEGHKRVEALKDTTFSVGEGEFVAIIGPSGSGKSTLLTIIGGLQKPSKGTVMINEKPFSEVAEKKRA
ALRFEEIGFILQASNLVPFLTVKDQLNLVNKVEKTKVDKQKRDDLLDELGILDLKDKYPSDLSGGERQRVAIARALYHEP
SVILADEPTASLDSEKAFEVVEILARETKNKKKATIMVTHDERLISQCDKVYVMKDGILSLRESNE

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
SARLGA251_00480	YP_005754062.1	ABC-type transport system ATPase	Not tested	Type-XI SCCmec	Protein	3e-43	52
unnamed	AAP55232.1	unknown	Not tested	SaPIbov2	Protein	1e-47	50

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
CAR_c19260	YP_004375599.1	putative ABC exporter, ATP-binding subunit	CP001581.1.gene798.p	Protein	6e-33	41