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Name : pdp (CAR_c18520) Accession : YP_004375525.1 Strain : Carnobacterium sp. 17-4 Genome accession: NC_015391 Putative virulence/resistance : Unknown Product : pyrimidine-nucleoside phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.2 Position : 1931602 - 1932897 bp Length : 1296 bp Strand : - Note : - DNA sequence : ATGGTCGATTTGATTACAAAAAAACAACATGGAAATACTTTAACAACTGAAGAGATCAATACCATGATCGAAGAATATAC AGAAGGTAAAATTCCAGAGTACCAAATGAGTGCAATGTTGATGGCAATTTACTTTAAAGATATGGATGATCGCGAAAAAA GTGATCTAACGATGAGTATTGTTCATTCTGGCGAAGAAATTGATCTGTCAGCCATTAAAGGTGTGAAGGTAGACAAACAT TCAACAGGTGGAGTAGGCGATACGACAACGCTTGTTTTAGCGCCTCTAGTAGCAAGCTTAGGCATTCCAATGGCTAAGAT GAGTGGACGCGGTCTTGGTCACACAGGTGGGACAATTGATAAATTAGAAGCCATTCCAGGATTTAACGTAGAATTGACTC AAGAAAAATTTATTGAGTTAGTAAATGAAAATAAAGTAGCTGTAATTGGGCAATCTGGTAACTTAACACCAGCAGATAAA AAACTGTACGCTCTAAGAGATGTAACAAGCACAGTTGAATCTATTCCATTGATTGCAAGTTCGATTATGAGTAAAAAAAT AGCAGCTGGAGCAGATGCTATCGTATTAGATGTGAAAACAGGTGCAGGAGCCTTCATGAAGACAACAGATGATGCTAGAT TGTTAGCTCACGCTATGGTTCAAATCGGAAACCGCGTTGGACGTAATACGATGGCCGTTATTTCTGATATGAGTCAACCA CTAGGTTTTGCAATTGGTAATGCTTTAGAAGTTAAAGAAGCAATCGACGCTTTAAACGGCAAAGGTCCTGCTGATTTAAT GGACTTGTGCTTAACATTAGGAAGCCAAATGGTTCATTTAGCTGGCATAGGAAAAGATTTAGATGAAGCAAGAGCTTTAT TAGAAGAGTCCATTAGAAATGGGAAAGCACTTGAAAAATTTAAAACATTTATTGCTTCTCAAGGCGGAGACACGAGCGTT ATTGATAATCCAGAGTTATTGCCAAAATCAGATTACCAAATTGATGTTTTAGCAAATAGAGACGGATTCGTTTCAGAAAT TATAGCAGATGAGTTGGGAATTGCGGCTATGATGCTAGGTGCTGGACGAGCTACCAAAGAAAGCGAAATTGATTTAGCAG TAGGTATTGTCTTGCATAAAAAAGTAGGCGATGCTGTTAAAAAAGGTGAAGCATTGTTGACGATTCATACAAATCAAGAA GAAGTTCCAGAAGTAGAACAAAAAATCTGGGAAGGTATCACAATAGCTGATTCAGCTACACCAATTCCCTTAATTCATGA AGTTATCTTAAGTTAA Protein sequence : MVDLITKKQHGNTLTTEEINTMIEEYTEGKIPEYQMSAMLMAIYFKDMDDREKSDLTMSIVHSGEEIDLSAIKGVKVDKH STGGVGDTTTLVLAPLVASLGIPMAKMSGRGLGHTGGTIDKLEAIPGFNVELTQEKFIELVNENKVAVIGQSGNLTPADK KLYALRDVTSTVESIPLIASSIMSKKIAAGADAIVLDVKTGAGAFMKTTDDARLLAHAMVQIGNRVGRNTMAVISDMSQP LGFAIGNALEVKEAIDALNGKGPADLMDLCLTLGSQMVHLAGIGKDLDEARALLEESIRNGKALEKFKTFIASQGGDTSV IDNPELLPKSDYQIDVLANRDGFVSEIIADELGIAAMMLGAGRATKESEIDLAVGIVLHKKVGDAVKKGEALLTIHTNQE EVPEVEQKIWEGITIADSATPIPLIHEVILS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 3e-83 | 49 |
