Gene Information

Name : ykcC (CAR_c18200)
Accession : YP_004375493.1
Strain : Carnobacterium sp. 17-4
Genome accession: NC_015391
Putative virulence/resistance : Virulence
Product : putative glycosyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 1898475 - 1899455 bp
Length : 981 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAACTATTACAATATTAATTCCTGCTTATAATGAAGAGGCAGTAATTGACAAAATGTATAAAAAATTAGATAGCGT
CTGCGGAGGTTTATCTCAGTATGCATTTGAATTTTTATTTGTGAATGACGGCAGTACAGATAGAACGCTTGAGCAGATAA
AAGCTTTTAAGGAAAAGGATTCACGTGTACAATACGTAGACTTATCCCGTAATTTTGGGAAAGAAACAGCTATGTTGGCA
GGTTTTGATTATGCTAAAGGAGATGCCTTGATCATTATTGATGCCGATCTTCAACAACCTCCAGAAACATTTGCTGAAAT
GATCCATTGGTGGGAAGAAGGCTACGATGATGTGTATGCTGTGCGTAAAGAACGCGAAGGTGAAACGTGGTTAAAAAAAT
GGACTTCTGATATGTATTACCGTGTACTACAAAATGTTGCTAAAGTAAAAGTTTACCCTCAAGCAGGTGATTTTAGATTA
TTAGACAAAAAATGTGTAGCTGCATTGACTCAATTGAGAGAGCATGAACGTTATACAAAAGGGATGTATGGCTGGATAGG
ATTTAAAAAGAAAGAAATATCTTATATAGCAGAAGCTAGAGCAGCTGGAGAAACAAAATGGAAGTTGTCAGCTTTGATGA
ATCTGGCTTTAAATGGCATAACATCTTACAGTACAATGCCTTTAAGAATTTGGTCCATTATTGGATTCATTATTTCGATG
TTTGCTTTTGTCTATTTGACGATTGAAATTATTCGAACGATGTTATTTGGAACGAGTGTTGCTGGTTACCCTTCTTTAAT
TGCTGGTATCTTATTTTTAGGTGGTATTCAGCTGATTTCACTTGGAATTATTGGGGAATACTTAGGTCGAGTTTTTGTCG
AAACGAAGGAACGGCCGGTATACTTTATTCAAGAATATTCAGAAAAAGAAATGAAGAAAGAGATGGATGTAAGTGATGAC
AAAGATAAAGAGTCTCGTTAG

Protein sequence : 
MKTITILIPAYNEEAVIDKMYKKLDSVCGGLSQYAFEFLFVNDGSTDRTLEQIKAFKEKDSRVQYVDLSRNFGKETAMLA
GFDYAKGDALIIIDADLQQPPETFAEMIHWWEEGYDDVYAVRKEREGETWLKKWTSDMYYRVLQNVAKVKVYPQAGDFRL
LDKKCVAALTQLREHERYTKGMYGWIGFKKKEISYIAEARAAGETKWKLSALMNLALNGITSYSTMPLRIWSIIGFIISM
FAFVYLTIEIIRTMLFGTSVAGYPSLIAGILFLGGIQLISLGIIGEYLGRVFVETKERPVYFIQEYSEKEMKKEMDVSDD
KDKESR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 1e-49 42
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 5e-46 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ykcC YP_004375493.1 putative glycosyltransferase VFG0670 Protein 1e-46 42