Gene Information

Name : CAR_c17950 (CAR_c17950)
Accession : YP_004375468.1
Strain : Carnobacterium sp. 17-4
Genome accession: NC_015391
Putative virulence/resistance : Virulence
Product : XRE family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1875940 - 1876131 bp
Length : 192 bp
Strand : +
Note : -

DNA sequence :
ATGCAAAATAAAATTGAACAATTACGTAAAGATAAAGGGCTGACACAAGCTGACTTAGCAAAAGCCTGTAATGTAACCCG
CCAAACTGTCAATGCTATCGAAAACAATAAATATGACCCTACTCTACAATTGGCCTTTTCATTATCTAAAATACTGAACA
CCGAAGTTGATAAGCTCTTTACTCCAGACTGA

Protein sequence :
MQNKIEQLRKDKGLTQADLAKACNVTRQTVNAIENNKYDPTLQLAFSLSKILNTEVDKLFTPD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 3e-12 58
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 1e-06 42
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 8e-07 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CAR_c17950 YP_004375468.1 XRE family transcriptional regulator VFG2168 Protein 3e-07 42
CAR_c17950 YP_004375468.1 XRE family transcriptional regulator VFG2175 Protein 3e-07 42