Gene Information

Name : ybaR (CAR_c01440)
Accession : YP_004373911.1
Strain : Carnobacterium sp. 17-4
Genome accession: NC_015391
Putative virulence/resistance : Resistance
Product : putative permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0659
EC number : -
Position : 147043 - 148476 bp
Length : 1434 bp
Strand : +
Note : -

DNA sequence :
ATGCGAAAATATAAAAATGAATGGTTTGGTAACATAAAAGGAGATGTTTTAGCTGGAATTGTTGTTTGCTTAGCTTTATT
TCCTGAAGTAATTGGTTTTATGTTAGTTGCTGGTGTGGAACCCATCGTGGGTGTCTATGCAACATTTTTTATCACAGCAA
CGGCCGCTTTTTTTGGAGGTCGGACTGGATTAATTTCAGCAGCTGCAGGCTCAGTTGCATTAGTACTTGCTCATTTAGTT
GCTGAATATGGGGTAGAATATCTTTTTGCTGCAACAGTTTTAGCCGGAATTATACAAGTTATACTAGGTTTATTTAAAGT
AGGAAAATTAATGCGTTACATACCAAAACCTGTTATGTTGGGATTTGTAAATGGTTTAGGGATTATGATGTTCTTATCTC
AATTGGATCATTTCAAGGGGAACTCGATTTTACTCGTACTTGGGATTGTTGGAATTGCCATTATATTTTTAGCTCCTAAG
TTAACAAAAAAAATTCCTGCACCGATTATTTCAATTGTAGTCGTTACCGCTCTCGTTTTAGGATTAGATTTAAATGCACA
ACTGTTAGGTGATTTAGGGACTATTTCAAGTGATCTACCTAAATTTGGTATTCCAAGTGTGCCTATGAATGTAGAAACAT
TGAAAATTATTTTACCTACTGCGCTTTCTGTGGCTATCGTTGGGTTAGTAGAATCACTATTGACAGCACAATTAGTAGAT
GATCTGACAAATGAACCAAGTGATAAAAATCGTGAATCAATGAGTCAAGGACTCGGAAATGTATTATCTGGTTTCTTTGG
CGGAATTGCTGGTTGTGGTATGATTGGACAAACTATTATTAATCTTAATTATGGTGGAATTGGTCGTTTAGCAACGTTCT
TGTCTGGTTTCTTCATGTTAATGTCGGTAGTATTATTTAATAAAGTGGTTATTCAAATTCCTATCGTTGCTCTGGCAGCA
GTAATGGTTGTTGTAGCCTATGAAACCATTGACTGGAGATCGGTTAAACGATTAAATATCATGCCTAAAAATGAAAGCTT
TGTTATGCTCTTAACTGTGGGAATTGTATTAGTTACACATAATCTAGCCTATGGTGTTGTTGCCGGGACTCTAGTAAGTG
CAATTTTTGCAGCCTTTAGCATGACCCATTTCCAAGTAGAAAAAGGAACAGATCATGATGAGTATCATTATAAGGCGCAT
GGACATCTTTACTTCGCATCAGCTGAAAAGTTTTTAGACTTTTTTGTACATGATTTTGATCATGAAGGTGAGTTAGTTAT
CGACGTCAGTGCTATGACTTTATGGGATTCTACGGCTGTTGAAGCTATTGATAAATTGATCAGTAAAAATAAAGAATCTG
GTTTAACTTTTATTAATGCGAATAAACAAAGCAAAGAGTTGTTTAAGAAGAACTCAATACACAAGATGAAATAA

Protein sequence :
MRKYKNEWFGNIKGDVLAGIVVCLALFPEVIGFMLVAGVEPIVGVYATFFITATAAFFGGRTGLISAAAGSVALVLAHLV
AEYGVEYLFAATVLAGIIQVILGLFKVGKLMRYIPKPVMLGFVNGLGIMMFLSQLDHFKGNSILLVLGIVGIAIIFLAPK
LTKKIPAPIISIVVVTALVLGLDLNAQLLGDLGTISSDLPKFGIPSVPMNVETLKIILPTALSVAIVGLVESLLTAQLVD
DLTNEPSDKNRESMSQGLGNVLSGFFGGIAGCGMIGQTIINLNYGGIGRLATFLSGFFMLMSVVLFNKVVIQIPIVALAA
VMVVVAYETIDWRSVKRLNIMPKNESFVMLLTVGIVLVTHNLAYGVVAGTLVSAIFAAFSMTHFQVEKGTDHDEYHYKAH
GHLYFASAEKFLDFFVHDFDHEGELVIDVSAMTLWDSTAVEAIDKLISKNKESGLTFINANKQSKELFKKNSIHKMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sup AEQ20903.1 sulphate permease Not tested Tn6166 Protein 3e-72 45
ABK1_0240 YP_005512812.1 Sul1delta fusion protein Not tested AbaR4d Protein 3e-72 45
sup AEZ06030.1 sulphate permease Not tested Tn6167 Protein 3e-72 45
BJAB07104_00259 YP_008207724.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 3e-72 45
BJAB07104_00275 YP_008207740.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 3e-72 45
BJAB0868_00263 YP_008211589.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 3e-72 45
sup AFH57200.1 sulfate permease Not tested AbaR4a Protein 3e-72 45
BJAB0868_00279 YP_008211605.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 3e-72 45
sup AFV47947.1 sulphate premease Sup Not tested AbaR25 Protein 3e-72 45
ABZJ_00239 YP_005524195.1 sul1delta fusion protein Not tested AbaR22 Protein 3e-72 45
sup AFV47978.1 sulphate premease Sup Not tested delta-AbaR25 Protein 3e-72 45
ABZJ_00258 YP_005524214.1 sul1delta fusion protein Not tested AbaR22 Protein 3e-72 45
ABTW07_3910 YP_005797158.1 sul1delta fusion protein Not tested AbaR4e Protein 3e-72 45
ABTW07_3869 YP_005797117.1 sulfate permease Not tested AbaR4e Protein 3e-68 45
unnamed AEO37462.1 Sup* Not tested AbaR4 Protein 1e-68 45
sulI CAJ77098.1 sulfate permease Not tested AbaR1 Protein 5e-70 45
sup AGK36657.1 sulphate permease Not tested AbaR26 Protein 5e-70 45
ACICU_00239 YP_001844898.1 MFS superfamily sulfate permease Not tested AbaR20 Protein 7e-70 45
sup ACN81033.1 sulphate permease Not tested AbaR5 Protein 7e-70 45