Gene Information

Name : ptkA (CAR_c14280)
Accession : YP_004375105.1
Strain : Carnobacterium sp. 17-4
Genome accession: NC_015391
Putative virulence/resistance : Virulence
Product : protein tyrosine kinase
Function : -
COG functional category : D : Cell cycle control, cell division, chromosome partitioning
COG ID : COG0489
EC number : -
Position : 1465885 - 1466607 bp
Length : 723 bp
Strand : -
Note : -

DNA sequence :
ATGTTTAAAAAGAGATTAAAAGAGAAAAAATATGAGGATAAAAATCTTATCACACTAATCGATCCCTCTTCTATTATTTC
AGAAGAGTTTCGGACACTTAGGACAAATATTCAGTTTTCTATGATAGATAAAGAGTTGAAAACATTAATGGTAACTTCTT
CAAAACAAGGAGAAGGCAAATCTACAATTGCTGCTAATCTAGCAGTTGTCTTTGCTTCCCAAGGGAAAAAGGTATTACTT
GTAGATGCAGATATGCGTAATCCATCACTTCATAAACTATTCAAAGTGCGAAATCAACAAGGATTGACAAGTATTCTCAC
AACTAAAAATAGACAAATAGCTAACCTTTTGCATAAAACTAGTCAAGAAAATTTAGAATTATTAACTAGCGGGATTTTAC
CACCGAATCCATCAGAATTACTAGCTTCTCAAAGAATGTCACAATTTATTGAGACAGTAAAACAAGAGTATGATCTGATT
GTTTTTGATTTGCCACCAGTCAATGTTGTTACGGATGCTCAAGTGATGGGAAATAAATCGGACGGGACAGTCTTTGTGAT
TCGAAAAGAAGTTGCAGATTTAAGTGAAATCTTAAAAGCTAAAGAATTATTGAACTTAGTACAAGCAAATGTTTTAGGAG
CTGTATTTAATAGTAAAGAACGAATGAAAAGCTTGAATAATGGGTATTATGCTAAAGAAAAAGAACTAGACAGCGTTGGT
TAA

Protein sequence :
MFKKRLKEKKYEDKNLITLIDPSSIISEEFRTLRTNIQFSMIDKELKTLMVTSSKQGEGKSTIAANLAVVFASQGKKVLL
VDADMRNPSLHKLFKVRNQQGLTSILTTKNRQIANLLHKTSQENLELLTSGILPPNPSELLASQRMSQFIETVKQEYDLI
VFDLPPVNVVTDAQVMGNKSDGTVFVIRKEVADLSEILKAKELLNLVQANVLGAVFNSKERMKSLNNGYYAKEKELDSVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1B AAA64641.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 3e-34 44
SSP0061 YP_300151.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 7e-36 44
cpsFD YP_006310771.1 putative autophosphorylating protein tyrosine kinase Not tested FWisland_4 Protein 4e-27 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ptkA YP_004375105.1 protein tyrosine kinase VFG1298 Protein 1e-35 42