Gene Information

Name : lspA (CAR_c12090)
Accession : YP_004374917.1
Strain : Carnobacterium sp. 17-4
Genome accession: NC_015391
Putative virulence/resistance : Virulence
Product : lipoprotein signal peptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0597
EC number : 3.4.23.36
Position : 1252530 - 1252958 bp
Length : 429 bp
Strand : +
Note : -

DNA sequence :
GTGGCCGTTGATCAGTTCACTAAATTTTTAACCGTGCAAAACATTGACTTATATGAAATTGTAGAAGTTGTTCCAAATGT
CTTATCATGGATGTACATTCAAAATAACGGAGCTGCTTGGAGCATTTTAGAAGGCCAAATGTGGTTCTTTTATATTATAA
CGATTATAGTAATTGGCTTTGTTATTTATTATTTGCAAAAATATGGTAAGCAAAGTCGGTTATTTTCAATTGCTTTAGCA
CTTATTTTAGCTGGTTCAATAGGGAATTTTATTGATCGTATTCGATTTGAATATGTTATCGACATGGTTCGTTTGGAATT
TATTAATTTTCCGATTTTTAACGTAGCCGATATGTCATTAAGTATCGGAGTATTTTTAATGATTATTTTTGTTTTCATAG
ACGAAAGAAATGAAAAAAAGAAACGCTAA

Protein sequence :
MAVDQFTKFLTVQNIDLYEIVEVVPNVLSWMYIQNNGAAWSILEGQMWFFYIITIIVIGFVIYYLQKYGKQSRLFSIALA
LILAGSIGNFIDRIRFEYVIDMVRLEFINFPIFNVADMSLSIGVFLMIIFVFIDERNEKKKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0072 NP_763627.1 lipoprotein signal peptidase Not tested SCCpbp4 Protein 4e-04 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lspA YP_004374917.1 lipoprotein signal peptidase VFG2161 Protein 2e-24 56