Gene Information

Name : ygzD (CAR_50p400)
Accession : YP_004373754.1
Strain :
Genome accession: NC_015390
Putative virulence/resistance : Virulence
Product : putative HTH-type transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 38038 - 38235 bp
Length : 198 bp
Strand : +
Note : -

DNA sequence : 
GTGGATAATAGAATAAAAGTTGCGCGTATTCAGGTTGATTTAACACAACAACAATTAGCTGAAAAAGTAGATGTCACTCG
TCAAACGATTAGTCTAATTGAAAAAGGCAAATATAATCCCTCTTTAAAACTATGTCTTAATATCTGCCACGCAGTCAATA
AAACACTAGATGAACTATTTTGGAAAGAAAGGGACTAA

Protein sequence : 
MDNRIKVARIQVDLTQQQLAEKVDVTRQTISLIEKGKYNPSLKLCLNICHAVNKTLDELFWKERD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 3e-07 43
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-07 43
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 3e-07 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ygzD YP_004373754.1 putative HTH-type transcriptional regulator VFG2175 Protein 7e-08 43
ygzD YP_004373754.1 putative HTH-type transcriptional regulator VFG2168 Protein 7e-08 43