Gene Information

Name : Corgl_1395 (Corgl_1395)
Accession : YP_004373311.1
Strain : Coriobacterium glomerans PW2
Genome accession: NC_015389
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : -
Position : 1624395 - 1625921 bp
Length : 1527 bp
Strand : -
Note : COGs: COG1190 Lysyl-tRNA synthetase (class II); InterProIPR018149:IPR002313:IPR006195:IPR004365:IPR 004364; KEGG: ccu:Ccur_13230 lysyl-tRNA synthetase (class II); PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type;

DNA sequence :
ATGTCTGATCACCGCGAATCTTCCGCTTCTGAGGAAGATGGCGCTTTGCCGGATGCTACGATAAACGACGAGCGCGCGCA
TCGTTTGGCGAAGCGCGCGGCGCTGATCGCCGATGGAGGCGACCCGTATCCCGAGAAGACCGTAGCGAAGCACCATGTTG
CCGAGCTCGAGCTCGCCTATGCCTCGCTGGCCGACGGGGAAAGCACCACTGATATCGTGAGCGTCGCAGGTCGCGTGATG
GCGAAGCGCGGACAGGGCAAGATCGCTTTTATCGTGGTGCGCGATCCGACAGGCGAGATTCAGCTGTTCTGCCGTATCAA
TGACATGCGCGATGAGGACTGGGCCCTTGTTCGCGATCTCGATCTGGGCGATATCGTCAACGTATCCGGTTGCGTCGTCC
GCACGCGTCGCGGTCAGCTCTCCATCGCCCCGACAAGCGTCGCGCTTCTGGCCAAGAGCGTTCGCCCTCTACCGGAGAAG
TTCCACGGTCTGTCCGACAAGGAGACCCGGTATCGCCAGCGCTACGTCGATCTCATCATGAACGATGAGGTGCGCTCGAC
TTTTGAGAAGCGCTCGCGGATTCTCTCGGCCTTTCGGCGTCACATGGATGCGGATGGCTACTTCGAGGTCGAAACGCCCA
TTCTTCAGAATATACAGGGCGGGGCGACCGCGAAGCCCTTCATAACGCACCATAACGCGTTGAATCAGGAGAATTATCTG
CGCATCGCGACCGAGCTCCACTTGAAGCGCTTGCTTGTGGGAGGTTTCGAGCGGGTGTACGAGATCGGGCGCATCTTCCG
CAACGAGGGGATGGATCAGACTCACAATCCGGAGTTCACCACGATGGAGGCGTACCGAGCATATTCAGATCTCGAGGGGA
TGAAGGCGCTGGCGCAAGGAGTCATCAAGGCCGCTAACGCTGCGGTGAACAGCTCCGAGCGGATCGATTACCAAGGGCGC
GCGATCGACCTGTCGGGAACGTGGGTGAGTCGTCCCATGGCAGAGATCGTATCGGAGGCTCTCGGATCACCGGTCAGCCT
CGACACAAGAGTCGAGGAGCTGCGCGCGCATGCCGCAGCGCACGGCATCGAGGTCGAGGCCGAGTGGACAGCGGGCAGGC
TCATAGCCGAGCTCTACGACGAGATCGGTGAGCCGACGATCATCGATCCGACCTTTGTGTGCGACTATCCCGTCGAAGTC
TCGCCTCTAGCAAAGCGTCGAAGAGACGATCCAAGGCTTACGCACCGCTTCGAGCTGGTCATCGCAGGTCATGAGTACGC
CAATGCCTTTTCAGAGCTGAATGACCCGGTGGATCAGGCGGAGCGCTTCAGAAGACAGGTCGAGGAGAAGGCGTCCGGGG
ACGATGAGGCGATGGAGTACGATGCTGACTTCATTCGGGCGCTCGAGTACGGCATGCCGCCCGCCGGCGGCATCGGCATC
GGCGTCGACAGGGTGGTCATGCTGCTGACGAATTCCGCAAGCATTCGAGACGTCCTGCTCTTCCCGCACATGCGGCCCGA
GGCGTAG

Protein sequence :
MSDHRESSASEEDGALPDATINDERAHRLAKRAALIADGGDPYPEKTVAKHHVAELELAYASLADGESTTDIVSVAGRVM
AKRGQGKIAFIVVRDPTGEIQLFCRINDMRDEDWALVRDLDLGDIVNVSGCVVRTRRGQLSIAPTSVALLAKSVRPLPEK
FHGLSDKETRYRQRYVDLIMNDEVRSTFEKRSRILSAFRRHMDADGYFEVETPILQNIQGGATAKPFITHHNALNQENYL
RIATELHLKRLLVGGFERVYEIGRIFRNEGMDQTHNPEFTTMEAYRAYSDLEGMKALAQGVIKAANAAVNSSERIDYQGR
AIDLSGTWVSRPMAEIVSEALGSPVSLDTRVEELRAHAAAHGIEVEAEWTAGRLIAELYDEIGEPTIIDPTFVCDYPVEV
SPLAKRRRDDPRLTHRFELVIAGHEYANAFSELNDPVDQAERFRRQVEEKASGDDEAMEYDADFIRALEYGMPPAGGIGI
GVDRVVMLLTNSASIRDVLLFPHMRPEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 5e-113 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Corgl_1395 YP_004373311.1 lysyl-tRNA synthetase VFG1668 Protein 3e-113 43