Gene Information

Name : Corgl_1225 (Corgl_1225)
Accession : YP_004373142.1
Strain : Coriobacterium glomerans PW2
Genome accession: NC_015389
Putative virulence/resistance : Unknown
Product : hydroxymethylpyrimidine synthase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 1438356 - 1439750 bp
Length : 1395 bp
Strand : +
Note : COGs: COG0422 Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: ele:Elen_2064 thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; SPTR: Phosphomethylpyrimidine synthase; TIGRFAM: thiamine biosynthesis protein ThiC; PF

DNA sequence :
ATGAACATCAGTGACAGCGAACACGGACGCCGCACACCAAGAGGTTGCGAACCGAAATCGAAGAGCGAGCCTCAGAGCCC
GAGCGCTCCCGTCACGCAGATGGAGTTCGCGCGCGCTGGTCGCATCACGGCCGCCATGCGCGCGGTCGCGGAGCGCGAGC
AACGCGACGTCGAGTTCATCCGCGAGCGCGTCGCCGACGGACGCATCGCCATACCCGCCAATGTCGTCCATCTCGCGAAG
GGGCTCGCGCCCGTAGGCGTCGGCGAGGGCCTCTCGACGAAGGTCAACGTGAACCTCGGGATCTCCGGGGACCGCGCCGA
CGCCGCCGAAGAGTGGCGCAAGGTCGGCATCGCGCAGGACAACGGCGCCGATGCCATCATGGATCTCTCCAACGCCGGCA
AGACCCAGGCGTTCAGACGCGACCTCATCGCGAAGACCCCGCTCATGGTGGGCACCGTGCCGATGTATGACGCGATCGGC
TACCTCGAGAAGCCGCTCGTCGAGCTCACCGGCGATGACCTCCTGCGCGTCGTGCGCACCCACGCCGAGGACGGCGTCGA
CTTCCTGACGATCCATGCGGGCATCAACCGGCGCGTCGTCGAGACGTTCAAGCAGACGGGCCGGCTCATGAACATCGTCT
CGCGCGGGGGCAGCCTGCTGTTCGGCTGGATGGAGGTGACCGGAGCGGAGAACCCGTTCTACGAGCGCTTCGATGAGGTG
CTCGAGATCTGCCATGAGTTCGATGTCACGATCTCGCTGGGGGACTCGTGCCGACCGGGGTGCCTCTATGACGCCAACGA
TGCGACCGAGACCGCCGAGATGATCGAGCTGGGCAAGCTCACGCGCCGAGCGTGGGACGCCGGCGTGCAGGTCATGGTCG
AGGGCCCAGGTCACATGGCGATCGACGAGATCGCAGCGACGGTCAAGATGCAGAAGCGGCTGTGCCACAACGCTCCGTTC
TACGTGCTCGGGCCCCTCGTGTGCGATGTCGGCGTGGGCTACGATCACATCACCGCGGCGATCGGCGGCGCGATCTCGGC
GAGCGCGGGCGCGGACTTCCTGTGCTACGTGACGCCCGCTGAGCACCTGTGCCTGCCCGACGCCGACGACGTGCTCGACG
GCCTCATCGCGACCAGGATCGCCGCGCACGCCGCCGACATCGCCAAGGGCGTGCCCGGCGCGCGCGACGCCGACGCGCGC
ATGGCGCAGGCCCGCCGCAAGCTCGACTGGGAGGCCATGTGGCCCGCTGCGCTCGATCCGGCGACGGCTCGCGCCCGCTT
CGAGGCCTCGCCGGCCGCGACCGAGGGAACCTGCACGATGTGCGGCAAGATGTGCGCCGTGCGAACCGTCAACAAGGTTC
TCGAGGGCACCACCATCGATCTCGATGCGAGCTGA

Protein sequence :
MNISDSEHGRRTPRGCEPKSKSEPQSPSAPVTQMEFARAGRITAAMRAVAEREQRDVEFIRERVADGRIAIPANVVHLAK
GLAPVGVGEGLSTKVNVNLGISGDRADAAEEWRKVGIAQDNGADAIMDLSNAGKTQAFRRDLIAKTPLMVGTVPMYDAIG
YLEKPLVELTGDDLLRVVRTHAEDGVDFLTIHAGINRRVVETFKQTGRLMNIVSRGGSLLFGWMEVTGAENPFYERFDEV
LEICHEFDVTISLGDSCRPGCLYDANDATETAEMIELGKLTRRAWDAGVQVMVEGPGHMAIDEIAATVKMQKRLCHNAPF
YVLGPLVCDVGVGYDHITAAIGGAISASAGADFLCYVTPAEHLCLPDADDVLDGLIATRIAAHAADIAKGVPGARDADAR
MAQARRKLDWEAMWPAALDPATARARFEASPAATEGTCTMCGKMCAVRTVNKVLEGTTIDLDAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 2e-58 42
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 2e-58 42