Gene Information

Name : Desac_0084 (Desac_0084)
Accession : YP_004369163.1
Strain : Desulfobacca acetoxidans DSM 11109
Genome accession: NC_015388
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 86693 - 87436 bp
Length : 744 bp
Strand : +
Note : COGs: COG1484 DNA replication protein; InterPro IPR003593:IPR002611; KEGG: mta:Moth_2240 IstB-like ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; SPTR: IstB-like ATP-binding protein; PFAM: IstB-like ATP binding p

DNA sequence :
ATGATCCCCCGACTGGACCTGCAGCTCAAGAGCCTGTCATTAACCAAAATCTTGGCCCACTACCAGGAGGAAGCCCACAA
GGCCGCCCAGGAAAAACTTTCTTACGAAAACTACTTGGCCCGGCTAGTGGAAATGGAGGCCATGAGCAAACTGGACCGCT
CTATCAATGCCAAGATTCACAAGGCTCGTTTCCCCTCCTTGAAAACCCTGGAAGAGTTTGATTTCTCCTTTCAGCCGCAG
CTCAACGAAAAAGAGATCATCCGGCTTGCTTCCCTGGACTTTCTGGAGAAAAAAGAAAACCTGCTTTTCCTGGGGCCTCC
AGGCGTCGGCAAGACCCATCTGGCCATTGCCTTTGGCGTTAAAGCCTGCATGGCCAAGTATCGGGTCTTATTTATCCGTA
CCCAAGATCTGTTGACTGATCTCAGTGTGGCTCACAAAACCGGCCGGCTGGGCCAGGTGCTGTTGAACCTCTCCCGACTG
GACCTGGTGATTCTGGACGAACTAGGCTATCTGCCCATCACCCCGGAACAGGCCAATCTCCTTTTTCAATTAGTATCGAT
TCGCTATGAGAAGGGGGCCATGATTTTGACCAGTAATTACGGCTTCGAAGATTGGGGACCGATTTTTACCGACCAGGTAA
TCGCTGCTGCCATCATTGACCCTCTGGTGCACCACTCCCATATTTTTGTGATTAACGGGAATAGTTTTCGCATGAAACAG
AAGCTTTTACCAGAGGCCGCATGA

Protein sequence :
MIPRLDLQLKSLSLTKILAHYQEEAHKAAQEKLSYENYLARLVEMEAMSKLDRSINAKIHKARFPSLKTLEEFDFSFQPQ
LNEKEIIRLASLDFLEKKENLLFLGPPGVGKTHLAIAFGVKACMAKYRVLFIRTQDLLTDLSVAHKTGRLGQVLLNLSRL
DLVILDELGYLPITPEQANLLFQLVSIRYEKGAMILTSNYGFEDWGPIFTDQVIAAAIIDPLVHHSHIFVINGNSFRMKQ
KLLPEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 2e-35 46
EC042_4097 YP_006098380.1 putative transposase Not tested Tn2411 Protein 4e-34 42
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 2e-41 41
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 1e-41 41
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 1e-41 41
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 1e-41 41
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 1e-41 41
unnamed CAA21402.1 - Not tested HPI Protein 1e-41 41
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 1e-41 41
api84 CAF28558.1 putative transposase Not tested YAPI Protein 1e-41 41
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 1e-41 41
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 1e-41 41
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 1e-41 41
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 1e-41 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desac_0084 YP_004369163.1 IstB domain-containing protein ATP-binding protein VFG1460 Protein 1e-35 46
Desac_0084 YP_004369163.1 IstB domain-containing protein ATP-binding protein VFG1515 Protein 6e-42 41
Desac_0084 YP_004369163.1 IstB domain-containing protein ATP-binding protein VFG1627 Protein 6e-42 41
Desac_0084 YP_004369163.1 IstB domain-containing protein ATP-binding protein VFG1606 Protein 6e-42 41
Desac_0084 YP_004369163.1 IstB domain-containing protein ATP-binding protein VFG1663 Protein 1e-41 41