Gene Information

Name : Desac_0718 (Desac_0718)
Accession : YP_004369779.1
Strain : Desulfobacca acetoxidans DSM 11109
Genome accession: NC_015388
Putative virulence/resistance : Virulence
Product : Fis family transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 841407 - 842798 bp
Length : 1392 bp
Strand : +
Note : COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR003593:IPR002078:IPR002197; KEGG: sat:SYN_02713 response regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal tra

DNA sequence : 
ATGGCCAGAACCATTCTGGTAGTTGACGACGAACCGCCTATCCTACAAACCCTCTCCGGCATCTTGCAAGATGAAGGCTT
CGAGGTGCTTACCGCTCAAGATGGCGAAACCGCCCTCAAAGTAGTGGAAGAGGAGACGCCGGATTTGGTGTTTCTGGACA
TTGCCCTGCCCGGTATGGATGGTCTGGAGGTGCTGCGGCATCTTAAAGAACAGCAGCCATTAACGCCGGTGGTGATGATT
TCGGCCTTCGGCAGTGTGGAAAATGCGGTCAAAGCCACTCGCTGGGGGGCCTATGACTTCATCGAAAAACCGCCTCACGC
CGATAAGATTATTGTCACGGTTCGCAACGCCCTGGAGATGTCCCGGCTTACCGAAGAGAACCTGCAACTCCGCCAGCGGG
CGGTTCACCCCCAGGAAATCATCGGCCAATCACCAGCAATGCAACAACTACGCGAGCAGGTGCGTATCGTTGCCCCTACT
AATGCCTGGGTGCTGATCACCGGAGAAAACGGCACTGGCAAGGAATTGGTAGCCTGGGCCATCCACCGCTTTAGCAAACG
CGCGGCCAAGCCCTTTGTCGAAGTCAATTGCGCCGCCATCCCCGAGGATCTAATCGAAAGTGAATTGTTCGGCCATGAAA
AAGGCGCTTTCACCGGCGCCACCGCCAAACGACGGGGAAAATTCGACCAGGCCCACGAAGGAACTCTGTTTCTGGACGAA
ATTGCCGATATGAGCCTCAAGACGCAGGCAAAGGTCCTACGAATTCTCCAGGAACAACGCTTTGAACGGGTAGGCGGCAA
TCGCCCGATCCAGGTCGATGTCAGGGTCGTGGCCGCAACTAATAAAAACTTGGAGGAACTCATCGGCCAGGGACAGTTTC
GGGAAGATCTCTATTACCGGATCAACGTCATACCCATTGCCGTGCCTCCTTTAAAGGAGAGAACCGAGGATATTCCTCTT
CTTATTGAGTATTTCCTCAAAGAATTTGCTCGCGCTGACGCCAGCCGGCCGAAAATCATGACCCCGGAGGCGGTGGACAT
TCTCCGCCGCCAACCCTGGCCTGGAAATGTCCGGGAGTTAAAGAACTTTGTACATCGTTTGGCCATACTTACTCCCGGAC
GGGTGATCGATGCCCCGCACCTGCCGGACAATCTTCGACAGGAAAAACCCCGAACTGAATCGGAATCGCACTTTCTTCAG
ATCAACTCCTTCAAGGAAGCCCGCTCCCGGTTTGAAAAGGAGTTTATCCGACGGAAGTTGGTCGAATTTCAAGGTAATGT
CGGTCTGACAGCCGAAGCCATCGGTTTGGAGCGCTCCCATCTGTATAAAAAAATCCGCAGTTATGGTTTAGAACACGGAC
GGGAGGGAGAAGAGGCGAATGACGGAGGATGA

Protein sequence : 
MARTILVVDDEPPILQTLSGILQDEGFEVLTAQDGETALKVVEEETPDLVFLDIALPGMDGLEVLRHLKEQQPLTPVVMI
SAFGSVENAVKATRWGAYDFIEKPPHADKIIVTVRNALEMSRLTEENLQLRQRAVHPQEIIGQSPAMQQLREQVRIVAPT
NAWVLITGENGTGKELVAWAIHRFSKRAAKPFVEVNCAAIPEDLIESELFGHEKGAFTGATAKRRGKFDQAHEGTLFLDE
IADMSLKTQAKVLRILQEQRFERVGGNRPIQVDVRVVAATNKNLEELIGQGQFREDLYYRINVIPIAVPPLKERTEDIPL
LIEYFLKEFARADASRPKIMTPEAVDILRRQPWPGNVRELKNFVHRLAILTPGRVIDAPHLPDNLRQEKPRTESESHFLQ
INSFKEARSRFEKEFIRRKLVEFQGNVGLTAEAIGLERSHLYKKIRSYGLEHGREGEEANDGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 5e-65 41
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 5e-65 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desac_0718 YP_004369779.1 Fis family transcriptional regulator BAC0467 Protein 2e-75 47
Desac_0718 YP_004369779.1 Fis family transcriptional regulator BAC0089 Protein 6e-79 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desac_0718 YP_004369779.1 Fis family transcriptional regulator VFG1249 Protein 2e-68 44
Desac_0718 YP_004369779.1 Fis family transcriptional regulator VFG1214 Protein 2e-67 42
Desac_0718 YP_004369779.1 Fis family transcriptional regulator VFG0116 Protein 3e-72 41