Gene Information

Name : Desac_0560 (Desac_0560)
Accession : YP_004369627.1
Strain : Desulfobacca acetoxidans DSM 11109
Genome accession: NC_015388
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : 1.1.1.193
Position : 662610 - 663698 bp
Length : 1089 bp
Strand : +
Note : COGs: COG1985 Pyrimidine reductase riboflavin biosynthesis; InterPro IPR004794:IPR011549:IPR002125:IPR002734; KEGG: mta:Moth_0915 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase; PFAM: Bacterial bi

DNA sequence :
ATGGCATTGGCCCTGAAGCTTGCCGCCCGGGGGGTCGGTTGCACCTCTCCCAATCCTATGGTGGGGGCGGTGGTAGTCAG
AGACGGGTACATCGTTGGCCGGGGGTATCACCGCCGCTACGGCGGCCCCCATGCCGAAGTGGAGGCCTTGCGCCAGGCGG
GTTCTCAGGCTGACGGGGCTACCCTGTATGTCACCCTGGAGCCCTGTAACCACTACGGCCAGACCCCGCCCTGCACCGAA
GCTATCCTGGCCGCCGGTATCCGTCGGGTGGTTATCGCCAATTCCGACCCAAATCCCCATGTTGCCGGAGGCGGCGCCGC
CTACCTGCAATCCAAAGGCCTGCTCGTCCAAAGCGGTCTCCTGGCGAAAGCCGGAAGTCGACTTAACGAAGCTTTTTTTA
AGGCCATGACCATCGGCCAGCCTTTCGTCATTGCAAAGGCGGCCGCCTCTCTGGACGGCAAGATCGCCACCCGGACGAAC
GACTCGCAATGGATTACCGGAGCTCCGGCCCGAACCTGGGTACACCGCCTGCGCCACCAGGTGGATGCTATCCTTGTCGG
GGTGGGAACTGTTATGGCCGACGATCCTCAGCTCACCACCCGGCTGCCTAGAGGACAGGGCAAAGACCCCATCCGACTCG
TGCTTGACAGCCGTCTACGCCTGCCACTTAACGCCAAGGTGCTGACGCAAATCTCTGCTGCCCCTACCTGGATGGTTTGC
ACCCCCTCGGCGCCTTCAGAAAAAATCACCGCTATCCAGGAACTGGGGGCGGAGGTTATAATCACTCCCGCCATCGAGAA
CCGGGTCGAGCTTCGAACCTTGCTGAAAATTTTAGGGGAGCGCCGCATTCAGAGCCTTTTAGTGGAAGGCGGCGCCGAGG
TTCAGGGCGCCTTCTTTGACGCCGGCCTGGTGGATAAATTCCACCTCTTCCTGGCCCCGAAATTTATCGGTGGCCGCCAG
GCCCCTGGTATTCTGGGCGGCCTGGGTGCCTCCCGCCTGGCCGAAGCCCAGCTAGCCCACGATCTTTCCATACGTCGGAT
CGGCGAAGATATCCTCATTAGCGGCTACCTTACCACCCCTGCAGGATAA

Protein sequence :
MALALKLAARGVGCTSPNPMVGAVVVRDGYIVGRGYHRRYGGPHAEVEALRQAGSQADGATLYVTLEPCNHYGQTPPCTE
AILAAGIRRVVIANSDPNPHVAGGGAAYLQSKGLLVQSGLLAKAGSRLNEAFFKAMTIGQPFVIAKAAASLDGKIATRTN
DSQWITGAPARTWVHRLRHQVDAILVGVGTVMADDPQLTTRLPRGQGKDPIRLVLDSRLRLPLNAKVLTQISAAPTWMVC
TPSAPSEKITAIQELGAEVIITPAIENRVELRTLLKILGERRIQSLLVEGGAEVQGAFFDAGLVDKFHLFLAPKFIGGRQ
APGILGGLGASRLAEAQLAHDLSIRRIGEDILISGYLTTPAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-43 44
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-43 44