Gene Information

Name : Desac_0374 (Desac_0374)
Accession : YP_004369446.1
Strain : Desulfobacca acetoxidans DSM 11109
Genome accession: NC_015388
Putative virulence/resistance : Unknown
Product : tyrosine recombinase xerC
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 456382 - 457269 bp
Length : 888 bp
Strand : -
Note : COGs: COG4974 Site-specific recombinase XerD; HAMAP: Tyrosine recombinase xerC; Tyrosine recombinase XerD; InterPro IPR011932:IPR004107:IPR002104; KEGG: bts:Btus_1324 tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal

DNA sequence : 
ATGGACGCCGCCGTAGAACAGTTTTTCCAGCATCTCATCGTTGAACGTGGTCTGGCCCCCCTGACGGTGGAAGCCTATGC
CCATGACCTGGCGGGATTGCGTTCCTTCCTGACAGGACTCGGCCGCAGCCGGTGGGATGAAACGACCCTGGAAGATCTGC
AATTTTTCTTGAATCATCTCGAAGAGCAAGGCGTTGGCCCCCGCAGCCGGGCTCGTAAACTCAGTGCCGTCCGACAGCTC
TATCGTTTCCTGCTGCGCCAGGGAACGACTTCGCATAATCCCCTTGAATGGCTGGACTCTCCTAAGCTCCCCAAAGGTCT
GCCTACGGTATTGGGGCTGGAGGAAGTAGATCGCCTGTTGGCTGCCCCTGATCCAACTACGCCACTAGGTCAACGCGATG
ACGCCATGCTCGAATTGCTGTATGCTACCGGTATGAGGGTGTCGGAGTTGGTGGGTTTGACCGCCTCGCAACTCGACCTT
CGCCGCGGTGTGGTTTTGGTCCGGGGTAAGGGTGGTAAAGAACGCCTGATTCCTATGGTCATGCGGGCGGTGGAAAAGCT
GCAGCTCTACTTGCAGTATGTCCGCCCGGTTCTGCTCAAGCGACAGAAAACCCCAGAGCTCTTTTTAAACCGCTCCGGAA
CCGGTTTAACCCGTCAAGGTTTCTGGAAGATTTTGAAAGGCTACGCCCGGCAAACGGGTCTTCCCAAGGACCTCAGCCCC
CACACCCTGCGGCATTCTTTTGCCACGCATCTGTTGTGGCAGGGCGCCGACCTCAGGGCCTTGCAGCTCCTCTTGGGACA
TGCCGACATCTCCACGACCCAGATTTATACGCATCTCCACACCGCTAGATTGCAGGAAATTCATCGGCAGGCCCACCCGC
GCGGGTAA

Protein sequence : 
MDAAVEQFFQHLIVERGLAPLTVEAYAHDLAGLRSFLTGLGRSRWDETTLEDLQFFLNHLEEQGVGPRSRARKLSAVRQL
YRFLLRQGTTSHNPLEWLDSPKLPKGLPTVLGLEEVDRLLAAPDPTTPLGQRDDAMLELLYATGMRVSELVGLTASQLDL
RRGVVLVRGKGGKERLIPMVMRAVEKLQLYLQYVRPVLLKRQKTPELFLNRSGTGLTRQGFWKILKGYARQTGLPKDLSP
HTLRHSFATHLLWQGADLRALQLLLGHADISTTQIYTHLHTARLQEIHRQAHPRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 2e-45 46
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 2e-45 46