|
Name : Desac_2688 (Desac_2688) Accession : YP_004371684.1 Strain : Desulfobacca acetoxidans DSM 11109 Genome accession: NC_015388 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 2962818 - 2964095 bp Length : 1278 bp Strand : + Note : COGs: COG0172 seryl-tRNA synthetase; HAMAP: seryl-tRNA synthetase, class IIa; InterPro IPR002317:IPR015866:IPR002314; KEGG: tye:THEYE_A0018 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; seryl-tRNA synthet DNA sequence : ATGCTAGACCTAAAATTCATCCGCACCCACCTGGGAGAAGTCAAACAGGCTTTGATTCACCGGGGACAGGAATTTCTGCT GGAAGATTTTGAAGCCCTGGATGAGATACGGCGGCTGCTGCTGGGCCAGGTGGAAGACCGGCGCCGGGAGCGCAACGCCC TTTCAGAAGAAGTCGGCCGATTGAAGAAGGCCAAACAAGACGCTGCCGCCTTGATGGAGCGGGTACGGGAGATCAATCAG GAGATCAAGGACCTGGAACTCGACCTGCGGGATAAGGAATCGGCCGTACAGGATTTTCTGCTGAACCTGCCCAATCTGCC CCATTCCTCGGTTCCGGTAGGGTCCACGAGTGACGACAATCCGGTAGTGAAACGCTGGGGGGAACCGCCGGTCTTTGGTT TTCCGGCCCGGCCGCATTGGGAGATAGGAGAATATCTGGGCATTTTAGATTTTGAAACCGCAGCCAAGATCACCGGAGCC CGTTTCGCCCTCCTGAAAGGCCCGGCTTCACGCCTGGAGCGGGCTCTGATCAATTTCATGCTCGACCTGCATACCCAAAA ACATGGCTATCTGGAGGTCTGGCCGCCATTTATTATCAACCGGGCCAGCGCCCAGGGGACGGGGCAGTTGCCGAAATTTA AAGAAGATCTCTTTAAACTTGAGGACTGGGATTACTATCTGACACCCACTGCCGAAGTACCGGTGACCAATATCCATCGC GACGAAATCTTGGCGGAAGAAGCTCTTCCCATTTCTTATACCGCCTATACCCCTTGTTTCCGTTCTGAAGCCGGTTCTCA CGGTAAGGACGTCAGGGGATTGATTCGCCAGCACCAGTTCGACAAGGTGGAGTTGGTGAAATTTACCGCTCCCGAGTCTT CGTATGAGGCACTGGAAAAGCTCTTGTCTGACGCCGAGGAGGTGCTGCAAGAGTTGGAACTGCCCTATCAGGTGGTGGTC CTGTGCACCGGCGATATGGGCTTCGCCGCCGCCAAGACCTATGATATCGAGGTCTGGCTGCCAGGACAGGGATTGTATCG GGAAATTTCCTCCTGCAGCAATTTCGAGGCCTTCCAGGCCAGGCGGGCTAATATCCGTTTCCGCCGCCGGGGCGCCAAAG GCACGGACCTGGTACACACCCTGAACGGCTCGGGCCTGGCAGTGGGCCGCACCTTGGTGGCTATCCTGGAAAATTATCAG CAAGCGGACGGCAGTGTGGTCATACCTCACAAGCTGCGCCCTTATATGGGGGGTATGGAGGTTATTCGCAGCTCTTAA Protein sequence : MLDLKFIRTHLGEVKQALIHRGQEFLLEDFEALDEIRRLLLGQVEDRRRERNALSEEVGRLKKAKQDAAALMERVREINQ EIKDLELDLRDKESAVQDFLLNLPNLPHSSVPVGSTSDDNPVVKRWGEPPVFGFPARPHWEIGEYLGILDFETAAKITGA RFALLKGPASRLERALINFMLDLHTQKHGYLEVWPPFIINRASAQGTGQLPKFKEDLFKLEDWDYYLTPTAEVPVTNIHR DEILAEEALPISYTAYTPCFRSEAGSHGKDVRGLIRQHQFDKVELVKFTAPESSYEALEKLLSDAEEVLQELELPYQVVV LCTGDMGFAAAKTYDIEVWLPGQGLYREISSCSNFEAFQARRANIRFRRRGAKGTDLVHTLNGSGLAVGRTLVAILENYQ QADGSVVIPHKLRPYMGGMEVIRSS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 7e-104 | 56 |
