Gene Information

Name : Desac_1544 (Desac_1544)
Accession : YP_004370580.1
Strain : Desulfobacca acetoxidans DSM 11109
Genome accession: NC_015388
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 1759304 - 1760071 bp
Length : 768 bp
Strand : +
Note : COGs: COG0689 RNase PH; HAMAP: ribonuclease phosphorolytic, bacterial-type; InterPro IPR002381:IPR001247:IPR015847; KEGG: gka:GK2666 ribonuclease PH; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nuc

DNA sequence :
ATGGTTGAACGATGTAGAAATACGCACCCGATGATTCGCTCCGAAGGAAGGCGTTTAGATGAGCTGCGGCAGGTCAAGAT
CACCCCGCGCTACCTTTCCCAGGCCGAAGGGGCTGTCCTTATCAGCCTCGGCCGCACTTGGGTAATCTGCACTGCCACCG
TGGAAGAGCGGGTTCCCGCTTTTCTCCAGGATTCCGGACAGGGTTGGGTGACTGCCGAATATGACATGCTGCCCCGCGCC
ACCCACAGCCGCCACCCGAGATCGGCCAACCTCGGGAAACCGAGCAGCCGCAGCCAGGAGATACAGCGGCTTATCGGCCG
TTCGCTGCGCGCCGTGGTCGATCTCGACGCCCTGGGGGAGCGGACTATCGTCCTGGACTGCGATGTCATCCAGGCCGACG
GCGGTACCCGCACCGCCGCTATCACCGGCGCCTTCGTGGCCCTTTGCGAAGCCTTGGCCGGCCTCCAGCGTCAGGAGATA
ATCGCCACTTTACCGGTCCTTGATCAGGTAGCGGCTGTGAGTGTGGGACTCGCCAATGACCAGATACTCGTCGACCTGGA
TTATCAGGAAGATTCCCGCGCCGAAGTCGACGCCAATTTCGTTGTCACCGGTCGCGGCCAGCTTGTGGAGGTGCAGGCGA
CCGGAGAGAGAGGTCCATTTCGACCGGCCCTGCTACTGGAAATGTTGGAGCGGGCCCAGCCGGCATTACAGCGTCTGCGT
CAGGCGCAGGAGAAGGCTCTACGCCCATGGATGTCCCTGCCGTGGTGA

Protein sequence :
MVERCRNTHPMIRSEGRRLDELRQVKITPRYLSQAEGAVLISLGRTWVICTATVEERVPAFLQDSGQGWVTAEYDMLPRA
THSRHPRSANLGKPSSRSQEIQRLIGRSLRAVVDLDALGERTIVLDCDVIQADGGTRTAAITGAFVALCEALAGLQRQEI
IATLPVLDQVAAVSVGLANDQILVDLDYQEDSRAEVDANFVVTGRGQLVEVQATGERGPFRPALLLEMLERAQPALQRLR
QAQEKALRPWMSLPW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 6e-53 56