|
Name : Marky_0815 (Marky_0815) Accession : YP_004367672.1 Strain : Marinithermus hydrothermalis DSM 14884 Genome accession: NC_015387 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.3 Position : 790058 - 792058 bp Length : 2001 bp Strand : + Note : COGs: COG0021 transketolase; InterPro IPR005478:IPR005475:IPR005474:IPR005476; KEGG: opr:Ocepr_1662 transketolase; PFAM: transketolase, N-terminal; transketolase-like, pyrimidine-binding domain; transketolase, C-terminal; PRIAM: Formaldehyde transketolase DNA sequence : ATGACGCGTGCGGTGACGGAGATCGAAAACCTCGCTATCAACGCGATTCGCTTCCTCGCGGTGGACGCGGTGGAGCAGGC CCAATCCGGCCACCCGGGGGCCCCCATGGGGCTGGCGCCGGTGGCGTACGTGCTGTGGCACGAGTTCTTAAAACACAATC CCCAGGACCCCACCTGGCCGGACCGTGATCGGTTCGTGCTTTCGGCGGGGCACGCTTCGATGTTGCTATACAGCCTGCTG CACCTGAGCGGGTACGACCTGCCCCTGGAGGAGCTTAAGCGGTTTCGTCAGTGGGGCTCCAGAACTCCGGGGCACCCCGA GTACGGGCACACGCCGGGCGTAGAGGTCACCACGGGTCCCTTGGGGCAGGGGATCTCCACCGCGGTGGGGATGGCCCTGG CGGAGAAGAAGCTCGCCGCGGAGTTTAACCGCGAGGGGCTCCGGATCGTGGATCACTACACCTACGTCATCGCCTCGGAC GGGGACCTGATGGAGGGGGTGGCTTCGGAGGCCAGCTCCCTCGCGGGGCACTGGGGGCTCGGCAAGCTGATCGTCATCTG GGACGACAACCGCGTCTCGATCGACGGGAGCACCGACCTGGCCTTCCGCGAGGACGTCCTGCAGCGGTACGCGGCGTACG GGTGGCACACGCTCCGCGTGGAGGACGGCAACGACCTCGACGCCCTCCGCGACGCGATCCGTAAGGCGCGGGCCGAGACC GAACGCCCCACGCTGATCGCGGTGCGGACCCATATCGGGTACGGCAGCCCCAAGCAAGACTCCGCCGAGGCCCACGGCGC GCCCTTAGGTCCGGAGGCCGTAGCCGCGGCACGTGAGGCGCTCGGCTGGCCGTACGCGCCGTTCGAGGTGCCCGAGGCAG TGTACGTGCACATGCGCCAAGCCGTGGAGAAGGGCATGGCGGCCCAGGAGGTTTGGGAGCAACGGCTCGAGGCCTACCTG GAGCGTTTCCCCGAGCTCGGGACGGAGTTCGTGCGTCGCGTGATCGAACGCCGCCTGCCCGAGGGGTGGGATGCCGAGAT GCCGCGGTTTACGCCCGGAGCGAAGGTCGCGACGCGCAAGGCGAGCGGTCAGGTGCTCGCGGCGATCGCGCCGAGACTGC CTGAGCTCGTGGGGGGGTCGGCCGACCTCACGCCTTCCAACAACACGCAAGTTCCCGGGATGGAGGACTTTACGCCTGAA CGCCCCACGGGCCGCTACGTGCACTACGGGGTGCGCGAGCACGCGATGGGGGCGATCATGAACGGGCTCTGCCTGCACGG CGGGTACCGACCGTACGGCGGCACCTTCCTCATCTTCTCCGACTACATGCGCCCCCCGGTGCGGCTCGCGGCCTTGATGG GCGTGGCGCCGATCTATGTTTGGACGCACGACTCGATCGGGTTAGGGGAGGACGGCCCCACGCACCAACCGGTGGAGCAC TTGATGGGGCTTCGGGCAATGCCGAACCTCTGGGTGATTCGCCCGGCCGACGCGACGGAGGTCCCGTACGCTTGGAAGCT CGCCTTGGAGCGCACCGACGGCCCGGTCGGGATCGTCCTGACCCGCCAGGGGCTGCCGGTCATCGACCGGGAACGGTACG CGGCTGCGGAGGGCGTGCTCCGGGGCGGGTACGTGCTCGCGGACGCACCCCGACCGGACGCCGTGATCGTCGCGACCGGA AGCGAGGTGCACCTGGCGCTCGCCGCGCGCGAACGCCTGCAGGCGGAGGGGGTTGCGGTGCGGGTGGTGAGCCTGCCTTG CTGGGAGGTGTTCGAGCAGCAGGATGCGGCCTACCGCCTCGAGGTCCTTCCCCCGGAGGTGCCCACGCTCGCGGTCGAGG CGGGGGTGGCCTTGGGTTGGGAGCGCTACGCGGACGCTGTGGTGAGCCTCGAGCGCTTTGGGGCTTCGGCGCCGGGAGGC GTGTTGTTTGAACGCTTCGGGTTTACGGTGGAGCGCGTGGTAGCCCGTGTGCGGGAGTTGTTGGGGGCGGCGCATGGTTA G Protein sequence : MTRAVTEIENLAINAIRFLAVDAVEQAQSGHPGAPMGLAPVAYVLWHEFLKHNPQDPTWPDRDRFVLSAGHASMLLYSLL HLSGYDLPLEELKRFRQWGSRTPGHPEYGHTPGVEVTTGPLGQGISTAVGMALAEKKLAAEFNREGLRIVDHYTYVIASD GDLMEGVASEASSLAGHWGLGKLIVIWDDNRVSIDGSTDLAFREDVLQRYAAYGWHTLRVEDGNDLDALRDAIRKARAET ERPTLIAVRTHIGYGSPKQDSAEAHGAPLGPEAVAAAREALGWPYAPFEVPEAVYVHMRQAVEKGMAAQEVWEQRLEAYL ERFPELGTEFVRRVIERRLPEGWDAEMPRFTPGAKVATRKASGQVLAAIAPRLPELVGGSADLTPSNNTQVPGMEDFTPE RPTGRYVHYGVREHAMGAIMNGLCLHGGYRPYGGTFLIFSDYMRPPVRLAALMGVAPIYVWTHDSIGLGEDGPTHQPVEH LMGLRAMPNLWVIRPADATEVPYAWKLALERTDGPVGIVLTRQGLPVIDRERYAAAEGVLRGGYVLADAPRPDAVIVATG SEVHLALAARERLQAEGVAVRVVSLPCWEVFEQQDAAYRLEVLPPEVPTLAVEAGVALGWERYADAVVSLERFGASAPGG VLFERFGFTVERVVARVRELLGAAHG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 2e-156 | 53 |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 8e-153 | 52 |
