Gene Information

Name : Marky_1945 (Marky_1945)
Accession : YP_004368785.1
Strain : Marinithermus hydrothermalis DSM 14884
Genome accession: NC_015387
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator, winged helix family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1952834 - 1953499 bp
Length : 666 bp
Strand : -
Note : COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: tra:Trad_0791 winged helix family two component transcriptional regulator; PFAM: Signal transduction res

DNA sequence : 
ATGGCCGGAGAACGCCTCTTGATCGTGGAGGACGACCCGCGGCTGGCGCGGCTGCTCGTGAACGAGCTCGCGGCCGCCGG
GTACGCCCCCAGCGCGGTGCACACCGGATCGGACGCCCTAGCGAAGCTCGAGGAGGAGGCCTTTGAGTTGGTCATCCTGG
ACCTGAACCTCCCGGACCTGGACGGCCTCGAGGTCGCGCACCGCGTCGCGGGCCAGAAGGACACGAGCATCCTGATGCTT
ACCGCGCGGGGCGACGTGGAGAGCCGCGTGCAGGGGCTGTACGCGGGCGCGAGCGATTACGTCACCAAGCCCTTTAGCCT
CAAGGAACTCCTGGCCCGGGTGCACGCCCGGCTGCGCGAGCGCAAGCGTCACGAGGACGTGATCCGCGTCGGGACGCTCG
AGCTCGACCGCGTGAAGCGGCAGTGCCGCGTGGATGGAGCGGTCGTGCCGCTCACCGCGCGGGAGTACGCCTTGCTCGAG
CTGCTCTTGGTGAACCGGGGGCGCATCTTCTCCAAGGAGGAGTTGGAGGACCGGCTTTACGGCATGGACCTGCCCGCCTC
GAACACGATCGAGGTCTTCATCTCCAACCTGCGCCGCAAGCTCGCGGCGCGGGGCGTGCAGGGCCTGATCACGACCGTGC
GGGGCATGGGGTACGTGGTGCGATGA

Protein sequence : 
MAGERLLIVEDDPRLARLLVNELAAAGYAPSAVHTGSDALAKLEEEAFELVILDLNLPDLDGLEVAHRVAGQKDTSILML
TARGDVESRVQGLYAGASDYVTKPFSLKELLARVHARLRERKRHEDVIRVGTLELDRVKRQCRVDGAVVPLTAREYALLE
LLLVNRGRIFSKEELEDRLYGMDLPASNTIEVFISNLRRKLAARGVQGLITTVRGMGYVVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 5e-25 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Marky_1945 YP_004368785.1 two component transcriptional regulator, winged helix family BAC0197 Protein 7e-31 42
Marky_1945 YP_004368785.1 two component transcriptional regulator, winged helix family BAC0638 Protein 1e-22 42
Marky_1945 YP_004368785.1 two component transcriptional regulator, winged helix family NC_002516.2.879194.p Protein 1e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Marky_1945 YP_004368785.1 two component transcriptional regulator, winged helix family VFG1390 Protein 3e-31 42
Marky_1945 YP_004368785.1 two component transcriptional regulator, winged helix family VFG0473 Protein 6e-26 41
Marky_1945 YP_004368785.1 two component transcriptional regulator, winged helix family VFG1389 Protein 1e-28 41