Gene Information

Name : Marky_1745 (Marky_1745)
Accession : YP_004368590.1
Strain : Marinithermus hydrothermalis DSM 14884
Genome accession: NC_015387
Putative virulence/resistance : Unknown
Product : phosphomethylpyrimidine synthase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 1741367 - 1742689 bp
Length : 1323 bp
Strand : +
Note : COGs: COG0422 Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: tth:TTC0319 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC; SPTR: phosphomethylpyrimidine synthase; TIGRFA

DNA sequence :
ATGACCCAACTGGAAGCCGCGAAACAAGGTCGCATCACAGAGCAGATGGCGTACGTCGCCGAACAGGAGGGCCTCGAGCC
CGAAACGGTCCGGGAGCTCGTCGCCGCGGGGCGCGTCGTGATCCCCGCGAACCCCAACCACACCACCCTCACCCGCTTCA
CCGCGATCGGTGAGGGGATGCGCGTCAAGGTCAACGCCAACCTCGGCACCTCCTACGACTACGTGAACCCTGAGGAGGAG
GTGGAGAAAGCCCGCGTCGCGATCGAGGCTGGCGCGGACACGGTGATGGACCTCTCCACCGGCGGGGACCTCGCCGCGAT
CCGCGCGCGCATCCTCGAGGTCGCCACGGTCCCGCTCGGCACCGTGCCCATCTACGAGGCGGAGTTCAAGGCCGCGGCGC
GGAAGAACTTCTTCGACATGAGCGCGGACGAGCTGTTCGAAACCATCGAGGCGCACGGCCGGGCCGGCGTGGACTACATC
ACCGTGCACGCCGGGGTCACGCTCGCCACCCTGGAGCGCTACCGCAACGCCGAGCGCGTGACCGGGATCGTGTCACGCGG
CGGCGGGCTGATGGCGGCCTGGATGCTCCAGAACGCCCAGGAGAACCCCCTCTACGCGCGGTTCGACGACCTCCTCGAGA
TCGCCCGCACCTACGACATGACCCTCTCTCTGGGGGACGGGCTCCGCCCGGGCTCCCTCGCGGACAGCACCGACCGCCCC
CAGATCCAGGAGCTCCTCATCATCGGTGAACTCGTCGAACGGGCCCGCCAAGCGGGCGTGCAGGCCATGGTGGAGGGTCC
CGGCCACATCCCCCTCAACGAGATCCAGACCAACGTCCAGATCCAGAAAAAACTCACGAACCACGCGCCCTTCTACATCC
TGGGCATGCTGCCGATCGACACCGGCGCGGGCTTCGACCACATCGTCGGCGCGATCGGCGGGGCGGTCGCGGGCTGGTAC
GGGGCGGACATGCTCTGCTACCTAACCCCCGCGGAGCACCTGGGCCTCCCCACGCCCGAGCACGTCCGGGAAGGCGTGAT
CGCCTTCAAGCTCGCCGCGCACATCGCGGACGTGGCGCGGGGCCGTCGGCCGGACCTCGAGCGCAACCGCCGCATGTCCG
AGGCGCGCTACCGGCTCGACTGGGAAACGCAGTTCCAGCTCGCCCTCTACCCCGAGGCGGCCCGCCGCATCTACGAGGCC
CGCGGCACGAAGACCAAGGCCTGCAGCATGTGCGGTCCCTACTGCCCCATGAACCTCGTGGAGGCCGTGCTGCGCGGGCA
ACGCAGCCAAGGCCTCGTCGAGCTCGAGGTGCGCCCGGGGTGA

Protein sequence :
MTQLEAAKQGRITEQMAYVAEQEGLEPETVRELVAAGRVVIPANPNHTTLTRFTAIGEGMRVKVNANLGTSYDYVNPEEE
VEKARVAIEAGADTVMDLSTGGDLAAIRARILEVATVPLGTVPIYEAEFKAAARKNFFDMSADELFETIEAHGRAGVDYI
TVHAGVTLATLERYRNAERVTGIVSRGGGLMAAWMLQNAQENPLYARFDDLLEIARTYDMTLSLGDGLRPGSLADSTDRP
QIQELLIIGELVERARQAGVQAMVEGPGHIPLNEIQTNVQIQKKLTNHAPFYILGMLPIDTGAGFDHIVGAIGGAVAGWY
GADMLCYLTPAEHLGLPTPEHVREGVIAFKLAAHIADVARGRRPDLERNRRMSEARYRLDWETQFQLALYPEAARRIYEA
RGTKTKACSMCGPYCPMNLVEAVLRGQRSQGLVELEVRPG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 1e-80 44
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 1e-80 44